Gene Information

Name : Ava_0003 (Ava_0003)
Accession : YP_320524.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Unknown
Product : binding-protein dependent transport system inner membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 3177 - 4118 bp
Length : 942 bp
Strand : -
Note : -

DNA sequence :
ATGTTAAAACGTTGGCTAAATCTCACTTCCACAATACCCGAAATATCAATTAAAAATACTATTGCTGGGCAAGAAAGCCT
CACTCAAGAAGCGTGGCGCAAATTTTGCGGTAATCGTCAGGCTATGTTGGGTGCTGTAGTATTACTGATTATTGTTTTGA
GTGTTGTGTTTGGGCCTTTGATTTACTCTGTCCCTATCAATAAAATTGATTTTGCTAAGTCCACCCTACCACCTAGTTGG
GAACATCCATTTGGGACTAATGATTTAGGTCAAGATATATTAGCCAGGATTTTGTATGGTGGCAGAATATCCATTGCTGT
GGGTGTGTTTTCAATGGTGGTGGCGATAACCTTGGGGATACTCATCGGCGCACTTTCAGGATTTTATGGCGGTTGGTTAG
ATGTGGTATTGATGCGGTTAACTGATTTGTGCCTGGCTTTACCGCGCCTACCCTTATTGTTATTGGTGATATTTTTGTTC
CGGGATGCCATTAAGGCGATCGCTGGCCCAGAACTAGGTATATTTGTCTTAGTCGTGCTAGTTATCGGCGGACTCAACTG
GATGTCTGTCGCTAGGTTAGTTAGGGCTGGGTTTTTAACTGTGCGCGAACAGGAATTTGTCACAGCAGCCCGCGCCCTCG
GTGCTTCCCCCAGACGGTTAATCTGGATTCATATTTTGCCCAATGTCATCAGTCCGGTATTGGTAGCAGCAACCCTCTCT
GTGAGTACCGCCATCGTCACAGAATCTACACTCAGCTTTTTTGGTTTGGGCTTTCCCCCTGATGTCCCCACTTGGGGACG
GATGCTTTACGATGCACAAAACTTTTTGGAGTTTGCACCGTATATGGTAGTGTTTCCAGGGACGGCAATATTTCTGACTG
TGTTAAGTATTAACTACATAGGTGATGGTTTAAGAGATGCCCTTGATCCTCGATTATCTTAA

Protein sequence :
MLKRWLNLTSTIPEISIKNTIAGQESLTQEAWRKFCGNRQAMLGAVVLLIIVLSVVFGPLIYSVPINKIDFAKSTLPPSW
EHPFGTNDLGQDILARILYGGRISIAVGVFSMVVAITLGILIGALSGFYGGWLDVVLMRLTDLCLALPRLPLLLLVIFLF
RDAIKAIAGPELGIFVLVVLVIGGLNWMSVARLVRAGFLTVREQEFVTAARALGASPRRLIWIHILPNVISPVLVAATLS
VSTAIVTESTLSFFGLGFPPDVPTWGRMLYDAQNFLEFAPYMVVFPGTAIFLTVLSINYIGDGLRDALDPRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 2e-30 41