Gene Information

Name : Ava_1944 (Ava_1944)
Accession : YP_322461.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2418915 - 2419631 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGGACATTCTAATTGTTGAGGATGAATCAGAAATTGCTCAGTTAATTCAACATTCCTTAGAAAAAGAGGGCTTTTCCTG
TCGGACTAGCCGCGATGGAATCAATGCTTTACGAATGTTCCAAGAACAACCACCAGATTTAATCATCCTAGACCTGATGA
TTCCAGGGTTAGATGGGTTGGAAGTTTGCGCGAGAATTCGCCAGAAACCTGGGGCAAAAGACCCATATATACTAATGCTT
ACAGCTAAAGGTGAGGAAATAGACCGGGTAATTGGCTTGTCTACGGGTGCTGATGACTATATGGTCAAACCCTTCAGCCC
TAGAGAGTTGGTAGCGCGAGTGCGGGCGCTTCTAAGGCGCAGTCTACGTCAAGGGGGACAAAATCAGGTAAGTCGAACTC
AACACTTTATAGTAGATGTAGACCAACGGACTGCTAGTCGTCAAATAGATGCCCATCAAGCAGAAGCTTTAGATTTAACT
ACTCTAGAATTTAATTTATTAAGCACTTTTGTCAGCAATCCTGGGCGGGTGTGGAACCGAACCCAACTAATTGACAAATT
GTGGGGAGATAATTTTTTTGGTGATGAGCGTGTTGTGGATACTCATGTAGCTAGGCTCAGAAAAAAAATTGAGCCTGATC
CCACTAATCCCAGTTTTATTAAAACTGTCGTCGGAGTTGGTTATAAATTTGAAGACTCTCCCGTAATTTCAGCATGA

Protein sequence : 
MDILIVEDESEIAQLIQHSLEKEGFSCRTSRDGINALRMFQEQPPDLIILDLMIPGLDGLEVCARIRQKPGAKDPYILML
TAKGEEIDRVIGLSTGADDYMVKPFSPRELVARVRALLRRSLRQGGQNQVSRTQHFIVDVDQRTASRQIDAHQAEALDLT
TLEFNLLSTFVSNPGRVWNRTQLIDKLWGDNFFGDERVVDTHVARLRKKIEPDPTNPSFIKTVVGVGYKFEDSPVISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_1944 YP_322461.1 two component transcriptional regulator NC_012469.1.7685629. Protein 4e-36 45
Ava_1944 YP_322461.1 two component transcriptional regulator HE999704.1.gene2815. Protein 2e-37 44
Ava_1944 YP_322461.1 two component transcriptional regulator NC_011595.7057856.p0 Protein 1e-33 43
Ava_1944 YP_322461.1 two component transcriptional regulator NC_010410.6002989.p0 Protein 1e-33 43
Ava_1944 YP_322461.1 two component transcriptional regulator NC_010400.5986590.p0 Protein 5e-33 43
Ava_1944 YP_322461.1 two component transcriptional regulator BAC0596 Protein 2e-30 43
Ava_1944 YP_322461.1 two component transcriptional regulator BAC0039 Protein 4e-31 43
Ava_1944 YP_322461.1 two component transcriptional regulator CP001918.1.gene3444. Protein 4e-31 43
Ava_1944 YP_322461.1 two component transcriptional regulator CP001138.1.gene2239. Protein 2e-30 43
Ava_1944 YP_322461.1 two component transcriptional regulator CP000034.1.gene2186. Protein 4e-31 43
Ava_1944 YP_322461.1 two component transcriptional regulator NC_002695.1.916589.p Protein 4e-31 43
Ava_1944 YP_322461.1 two component transcriptional regulator AE000516.2.gene3505. Protein 6e-35 43
Ava_1944 YP_322461.1 two component transcriptional regulator CP000647.1.gene2531. Protein 2e-31 42
Ava_1944 YP_322461.1 two component transcriptional regulator AF155139.2.orf0.gene Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_1944 YP_322461.1 two component transcriptional regulator VFG1702 Protein 1e-27 41