Gene Information

Name : Ava_1600 (Ava_1600)
Accession : YP_322118.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : 3.6.3.29
Position : 1975316 - 1976113 bp
Length : 798 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAATTGCGAACTTTTCCTTAGCAACTAATTCCATGCGGGAACCAGTGGATACATCAACAGCAACAGCAACAATTAA
TATCTCCCATCTAGGGGTACACTACCGTACACAAGAAGCCTTGCGGGATGTTAACTGTATTGTCAAACCGGGACGAATAA
CAGGAATATTTGGCCCTAACGGTGCTGGTAAAAGCACTCTGATGAAAGCAATGTTAGGCTTGGTTCCCGTTAGCAGTGGT
AAGGTATTATACCAAGAAAAACCCCTGATGCAGCAATTGGGGAAAGTTGCTTACGTTCCCCAACGTAGCCAAATTGACTG
GACTTATCCCGCCGTAGTTTGGGATGTGGTGATGATGGGACGGGTAAAGAAAACAGGTTGGTTACGTAGTTTCTCGGCTG
TGAGTCGCCAAGTTGCCAAGAATGCCTTAGAACGAGTGGGAATGTTGGATTATTGCGATCGCCCCATAGGACAATTATCA
GGGGGACAACAACAACGGGTATTTTTAGCGAGGGCTTTAGCACAACAAGCAGACATATTCTGTTTTGATGAACCCTTGGT
AGGTATCGACCAAAAAACCCAAACAGTTATTTTTGAGGTTTTCCATGAACTAGCTGCGGCTAACAAAATTGTGTTGGTAG
TTAACCACGATTTAGGCGAATCCATCAGCCATTTCGATGATTTAGTATTACTCAACCGTGAATTAATCGCCGCAGGTTCC
CGCCAACAAGTACTTACAGAGGATAACCTGCACCAAGCTTACGGCGGTAAAGTCATCTATTTCTCGGATGCAGCTTGA

Protein sequence : 
MQIANFSLATNSMREPVDTSTATATINISHLGVHYRTQEALRDVNCIVKPGRITGIFGPNGAGKSTLMKAMLGLVPVSSG
KVLYQEKPLMQQLGKVAYVPQRSQIDWTYPAVVWDVVMMGRVKKTGWLRSFSAVSRQVAKNALERVGMLDYCDRPIGQLS
GGQQQRVFLARALAQQADIFCFDEPLVGIDQKTQTVIFEVFHELAAANKIVLVVNHDLGESISHFDDLVLLNRELIAAGS
RQQVLTEDNLHQAYGGKVIYFSDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-40 43
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-40 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-41 41
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-41 41
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 7e-41 41
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 7e-41 41
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_1600 YP_322118.1 ABC transporter-like protein BAC0400 Protein 2e-45 44
Ava_1600 YP_322118.1 ABC transporter-like protein BAC0440 Protein 4e-39 42
Ava_1600 YP_322118.1 ABC transporter-like protein BAC0350 Protein 1e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_1600 YP_322118.1 ABC transporter-like protein VFG0526 Protein 1e-41 41