Gene Information

Name : Ava_1599 (Ava_1599)
Accession : YP_322117.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1974218 - 1975063 bp
Length : 846 bp
Strand : -
Note : -

DNA sequence :
ATGTTAGAAGCTTTAATTGAGCCGTTGCAATATGGCTTTATGCAGCGATCGCTTGTGATTGCTATTTTAGTAGGTTTGTT
GTGTGCGGTTGTGGGTAGTTACTTGATGGTGCAAAGATTGGCGCTGTTGGGTGATGCTATCAGTCACTCGGTTTTGCCAG
GACTAGCGATCGCTTTTATGGTGGGCGCTAACATATTCGTGGGCGCATTTATTGCTGGGGTTTTGAGTACGATAGCGATC
GCTTGGATTAGGACGCGATCGCCCATCAAAGAAGATGCTGCAATGGGTATAGTATTTTCAGCATTCTTCGCCTTGGGTAT
TACCTTGATTACCGTTGTTCAAAAAGATAATAAAATCGACCTCAATCACTTTCTCTTTGGTAATATCCTTGGCGTGACTG
TTGATGAGGTGCGTGATACCGCCATTATCGCCGCTATAGTTTTAACGGTCGTAATTTTATTATATAAGGAACTATTATTT
TACACCTTTGATCCTTTAGGCGCTCAAGCCGCAGGCTTACCAGTAAATCGCTTAAACTTTGGTTTAATGCTGCTGATTGC
TCTAACAATTGTCGCCAGCATGAAAGCAGTAGGCGTAATCTTAGTACTATCACTGTTAATTACACCAGGAGCAACCGCTT
ACCTATTGGTGAAACGCCTACACCAAGTCATGATCTTAGGCGCAGGGATAGGGGTTTTTTCGAGTATTAGCGGTATGTAC
CTGAGTTACTTTTATAATTTACCCTCCGGCCCAGCGATCGTTCTAGTAGTTTCAGGACTATTCCTATTAGCATTACTATT
CAGTCCCAAACACGGAATCCTAATACCAAACTCATATCAAAAATAA

Protein sequence :
MLEALIEPLQYGFMQRSLVIAILVGLLCAVVGSYLMVQRLALLGDAISHSVLPGLAIAFMVGANIFVGAFIAGVLSTIAI
AWIRTRSPIKEDAAMGIVFSAFFALGITLITVVQKDNKIDLNHFLFGNILGVTVDEVRDTAIIAAIVLTVVILLYKELLF
YTFDPLGAQAAGLPVNRLNFGLMLLIALTIVASMKAVGVILVLSLLITPGATAYLLVKRLHQVMILGAGIGVFSSISGMY
LSYFYNLPSGPAIVLVVSGLFLLALLFSPKHGILIPNSYQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 1e-42 42
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 8e-43 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-45 41
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-45 41
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-45 41
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-45 41
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-45 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_1599 YP_322117.1 hypothetical protein BAC0442 Protein 4e-45 43
Ava_1599 YP_322117.1 hypothetical protein BAC0352 Protein 1e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_1599 YP_322117.1 hypothetical protein VFG0528 Protein 1e-45 41