Gene Information

Name : Ava_1534 (Ava_1534)
Accession : YP_322052.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Unknown
Product : RNA binding S1
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : 2.7.7.8
Position : 1881708 - 1883867 bp
Length : 2160 bp
Strand : -
Note : -

DNA sequence :
ATGCTGAACATTCCTCAACTACTGGCAACTGAACTAGAACTCAAACCCTTTCAGGTGCAAAATGCGCTGGAACTTTTGGC
GGAGGGTGCGACTATTCCTTTTATTTCCCGTTATCGCAAAGAACGCACTGGTGAAATGAATGAGGTGCAGTTGCGTGATT
TAGCTGATAGGTATACTTACTTAACGGAATTAGAAGAAAGAAAGTCGGTAATTTTGAAAGCTATTACCGAACAGAATAAA
CTGACGGATGAACTACAAGAGAAAATCGTCTCTTGTTTACAAAAAACTGAACTTGAGGATTTATACTTACCCTATCGTCC
TAAGCGCCGGACTCGCGCCACTATTGCTAGAGAGAAGGGATTACAACCTTTAGCGGATTTCATTAAGTCTTTAAATACTA
AAAACCCCGTTTCTGCATCATTATCGGAAGAAGCAGCAAGATATATTTCTGAAACTCAGGGAGTCACCAGCGCCGATGAA
GCACTAAAAGGTGCGGCTGATATTTTAGCGGAGGAAGTGGCAGAAAAGGCTGATTTACGTGCCTATATTCGAGATTATCT
CTTAGAAGATGGGGTGTTTGTTTCTCGTATTAAAGATGATTACCCGGAAGGTACAACCAAGTTTGAAATGTACCGCAACT
ATCAAATTAATGTGAAAAATATTGCCCCCCACAATTTGCTGGCGTTGTGTCGGGGTGAAACTGAGGGAATATTAAGCTTT
GATGTGGTATTTGCAGAAGATTGGGTTCTTTCTTACTTAGAATCTCAAGAAATTAAAACAAAAGTGCAGGGAATTCGGGA
TTTCTATCAAGCGATGCTGAAAGATGCGTTCAACCGTTTGATGAAAAATTCCCTTATCAGTGAAGTCATTGCTGATAAGA
AAACCTATGCGGATATTGAGTCTATTCGGACATTTGAAATCAATTTGCGTGAATTGTTGCTATCTGCGCCGGCGGGAATG
AAACCAACTATGGCTATTGACCCTGGGTTTAGAACTGGCTGTAAAGTGGCAATTATTGACCAAACTGGGAAATTTCTGGA
ATATCAAGCGGTATTTCCTCACCAAGCTGCGGAACAACGGACAAAAGCGGCTCAAATTCTCAAAAATCTGATTGAAAAAT
ACAAAATTGAGTTAATAGCCATTGGTAATGGTACAGCATCACGGGAAACAGATGAGTTTGTCATGCAGGTATTACAAACA
CTAGACCGTAAACCTACCAAGGTGATGGTCAATGAATCTGGTGCATCTATATATTCTGCTAGCAAAGTCGCACTGGAAGA
GTTTCCTGATTTAGATGTGACGGTGCGGGGTGCAATTAGTATTGGTCGGCGTTTGCAAGACCCGTTAGCGGAATTGGTGA
AAATAGATCCGAAATCGATTGGTGTGGGACAATACCAGCATGATGTTGATCAGAAATTGTTGAAGAAGAAGTTAGATGAG
ACTGTAGAAAGCTGCGTTAACTACGTGGGTGTAGATTTAAATACCGCTTCTAAGGAACTGTTAACTTTTGTTTCGGGAAT
TACACCAGCAGTCGCTAATAATATTGTGGCTTACCGTAACCAGTATGGAGCTTTTAAAAATCGTCGCCAACTTTTGAAGG
TTCCCAAGTTGGGGCCGAAAGCTTTTGAACAGGCGGCGGGGTTCCTAAGGATTCGTGGCGGTGATAACCCTTTGGATAAT
ACAGCAGTGCATCCAGAAAGTTATGCAGTAGTGGAAGCGATCGCCTCTGACTTAAGTGTAACTTTAAATCAGGTAACACA
AATTGCCGAAAAACTCAAAAAAGCCAACTTGAAGAAATATGTCACCGATACAGTTGGTGAACCGACACTGCGGGACATTC
TCAGCGAATTAGAAAAACCGGGGAGAGACCCCCGTGCAGAATTTAAGTACGCCACCTTCAAGGAAGGGATTAAAGAAATC
ACCGACTTGCAAGAAGGGATGGAATTGGAAGGGATTGTCACCAATGTTGCTAACTTTGGTGCGTTCGTCGATATTGGTGT
TCATCAAGATGGTTTGGTGCATATCTCTCAACTGACTGATAGATTTGTTGATGACCCCAAGAAAGTTGTCAAGGTGGGAC
AAGTGGTTAAGGTGAGAGTGCTGGAAGTCAACGCCAAATTGAAAAGAATTAGTTTGTCGATGAAAGCAGTGAAGCAATAG

Protein sequence :
MLNIPQLLATELELKPFQVQNALELLAEGATIPFISRYRKERTGEMNEVQLRDLADRYTYLTELEERKSVILKAITEQNK
LTDELQEKIVSCLQKTELEDLYLPYRPKRRTRATIAREKGLQPLADFIKSLNTKNPVSASLSEEAARYISETQGVTSADE
ALKGAADILAEEVAEKADLRAYIRDYLLEDGVFVSRIKDDYPEGTTKFEMYRNYQINVKNIAPHNLLALCRGETEGILSF
DVVFAEDWVLSYLESQEIKTKVQGIRDFYQAMLKDAFNRLMKNSLISEVIADKKTYADIESIRTFEINLRELLLSAPAGM
KPTMAIDPGFRTGCKVAIIDQTGKFLEYQAVFPHQAAEQRTKAAQILKNLIEKYKIELIAIGNGTASRETDEFVMQVLQT
LDRKPTKVMVNESGASIYSASKVALEEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKKLDE
TVESCVNYVGVDLNTASKELLTFVSGITPAVANNIVAYRNQYGAFKNRRQLLKVPKLGPKAFEQAAGFLRIRGGDNPLDN
TAVHPESYAVVEAIASDLSVTLNQVTQIAEKLKKANLKKYVTDTVGEPTLRDILSELEKPGRDPRAEFKYATFKEGIKEI
TDLQEGMELEGIVTNVANFGAFVDIGVHQDGLVHISQLTDRFVDDPKKVVKVGQVVKVRVLEVNAKLKRISLSMKAVKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 4e-153 50