Gene Information

Name : Ava_0140 (Ava_0140)
Accession : YP_320661.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 183779 - 186409 bp
Length : 2631 bp
Strand : +
Note : -

DNA sequence :
ATGCAGCCTACAGATCCTAATAAATTTACTGATAAAGCCTGGGAAGTAATTGTCAAATCTCAGGATATAGTTCGGGCATA
TCAACAACAACAGCTAGATGTTGAACATTTAATTCTGGCTCTGATAGAAGATCCTACTAGTTTAGCTGTGCGGATTTTGG
GTCGTGCAGAAATTGACCCGATTCGCTTACAACAGCAATTAGAAGCTTTTACCCAGCGTCAACCGAAAGTAGGCAAAAGT
GACCAACTTTACCTCGGTCGCAGCTTGGATGTTATGCTCGATCGCGCCGAGGAAATTCGGGAGCGAATGAAGGATGGCTA
CATCTCTGTAGAACATATACTTTTAGCTTTTGTGGATGATGAACGTGTTGGTAGGAAGGTCCTCAAAGGCTTTAGTGTAG
ACAGTGCCAAGATAGAAGCGAGTATCAAGGCTGTTCGTGGTAGCCAAAAAGTGACAGACCAAAATCCAGAATCTCGTTAT
GAAGCCTTACAGAAATTTGGTAGGGATTTGACAGAACAGGCAAAATCTGGAAAATTAGACCCAGTTATTGGACGAGATGA
CGAAATTCGCCGGGTAATTCAGGTGTTATCTCGCCGGAGCAAAAATAATCCCGTCTTGATTGGTGAACCTGGGGTTGGTA
AGACAGCGATCGCCGAAGCTTTGGCACAGCGTATAGTTAATGGAGATGTCCCGGAATCTCTAAAAAACCGTCAATTAATC
TCTTTAGATATCGGGAGTTTGATTGCTGGGGCAAAATATCGAGGCGAATTTGAAGACCGATTAAAAGCCGTCCTCAGGGA
AGTTACGGAATCCAACGGTAATATTGTTTTATTTATTGATGAACTACATACCGTCGTAGGTACTGGTTCTAACCAACAAG
GAGCAATGGATGCGGGTAACTTGCTCAAACCCATGCTGGCGCGCGGAGAACTGCGGTGTATTGGGGCGACGACCTTAGAT
GAGTTTCGCAAGTTCATCGAAAAAGATGCAGCCTTAGAACGGCGTTTTCAACAAGTGTACGTAGACCAACCAAGTGTAGA
AAATACGATTTCTATTCTGCGGGGGTTGAAGGAACGCTACGAAGTCCACCATAATGTGAAAATCTCTGACTCTGCACTGG
TAGCCGCAGCAACTTTATCAGCACGTTATATTGCTGACCGCTTTCTACCAGATAAAGCCATTGATTTAGTCGATGAAGCC
GCCGCCCAATTAAAAATGGAGATTACCTCCAAACCAGCAGACTTGGAAGCCATTGACCGCCGTTTGATGCAGCTAGAAAT
GGAAAAGCTGTCCTTGGCGGGAGAGGAGAAAGTTGCAGCACCAACTAAGGAACGTTTAGAGCGAATTGAGCTAGAAATCA
CCAATTTAACCGAAAAGCAGCAAGATTTAAACAACCAATGGCAAGGTGAAAAGCAGGTATTAGAAGCTATTAGTCTGTTA
AAGAAAGAAGAAGACGCTTTAAGGGTGCAGATTGAGCAAGCAGAACGCGCCTATGATTTGAATAAAGCGGCGCAGTTGAA
GTATGGCAAACTGGAAGGAGTACAGCGCGATCGCGAAGCTAAAGAAGCAAAACTCTTAGAATTACAAAGCCAAGGTTCTA
CCCTGTTGCGTGAACAAGTCACCGAAGCCGACATCGCCGAAATCGTCGCCAAGTGGACAGGTATCCCTGTAAATCGCCTG
TTGGAATCAGAACGGCAAAAACTCCTACAACTAGAAAGTCACTTACATCAACGGGTTATCGGCCAGCAAGAAGCAGTGGA
AGCAGTTTCCGCCGCCATTCGCCGCGCCCGCGCTGGGATGAAAGACCCCAATCGCCCCATCGGCTCATTCTTATTCATGG
GGCCGACAGGGGTAGGTAAAACCGAACTCGCCCGCGCTTTAGCCCAGTTCCTCTTCGACTCCGATGATGCTTTAGTGCGC
TTAGATATGTCCGAGTACATGGAAAAACACTCAGTCTCTCGCTTAGTCGGCGCACCTCCTGGTTATGTAGGCTACGAAGA
AGGTGGACAACTTTCGGAAGCAGTCCGCCGCCATCCTTATTCTGTAGTGTTATTGGATGAAGTAGAGAAAGCCCACCCCG
ATGTGTTTAATATTTTATTGCAAGTGCTGGATGATGGCAGAATTACTGATTCCCAAGGTAGAACAGTAGATTTTCGCAAC
ACCGTCATTGTCATGACCAGTAACATCGGTAGCGAATATATCTTAGATGTGTCTGGTGACGATACCAAGTATGACACAAT
GCAGAATCGGGTCATGGATGCCTTGCGATCGCACTTCCGCCCCGAATTTCTCAACCGCGTTGATGATACAATCCTCTTCC
ATGCCCTCAGTCGTAGCGAAATGAGCCACATCATCCGTATTCAACTCAAACGGGTGGAAAGTCTCCTGAGAGAACAAAAA
ATCTCCTTTGAAATCTCCGCCGCCGCCTGTGATTTCCTAGTAGAAAAAGGCTATGACCCAGTTTACGGCGCACGCCCCCT
CAAACGAGCCATCCAGCGAGAAATCGAAAACCCCCTCGCCACCAAGATATTAGAAAACACCTTTATCTCCGGTGACACCA
TTTACATAGACCAAGGCGAAAATGGTTTAAGTTTCACTAATAAAGCACCAGTAAAAGTTTCCATCCCCTAA

Protein sequence :
MQPTDPNKFTDKAWEVIVKSQDIVRAYQQQQLDVEHLILALIEDPTSLAVRILGRAEIDPIRLQQQLEAFTQRQPKVGKS
DQLYLGRSLDVMLDRAEEIRERMKDGYISVEHILLAFVDDERVGRKVLKGFSVDSAKIEASIKAVRGSQKVTDQNPESRY
EALQKFGRDLTEQAKSGKLDPVIGRDDEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEALAQRIVNGDVPESLKNRQLI
SLDIGSLIAGAKYRGEFEDRLKAVLREVTESNGNIVLFIDELHTVVGTGSNQQGAMDAGNLLKPMLARGELRCIGATTLD
EFRKFIEKDAALERRFQQVYVDQPSVENTISILRGLKERYEVHHNVKISDSALVAAATLSARYIADRFLPDKAIDLVDEA
AAQLKMEITSKPADLEAIDRRLMQLEMEKLSLAGEEKVAAPTKERLERIELEITNLTEKQQDLNNQWQGEKQVLEAISLL
KKEEDALRVQIEQAERAYDLNKAAQLKYGKLEGVQRDREAKEAKLLELQSQGSTLLREQVTEADIAEIVAKWTGIPVNRL
LESERQKLLQLESHLHQRVIGQQEAVEAVSAAIRRARAGMKDPNRPIGSFLFMGPTGVGKTELARALAQFLFDSDDALVR
LDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLSEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRN
TVIVMTSNIGSEYILDVSGDDTKYDTMQNRVMDALRSHFRPEFLNRVDDTILFHALSRSEMSHIIRIQLKRVESLLREQK
ISFEISAAACDFLVEKGYDPVYGARPLKRAIQREIENPLATKILENTFISGDTIYIDQGENGLSFTNKAPVKVSIP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-110 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-108 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-108 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_0140 YP_320661.1 ATPase VFG2084 Protein 1e-116 44
Ava_0140 YP_320661.1 ATPase VFG2076 Protein 7e-123 43