Gene Information

Name : Ava_1234 (Ava_1234)
Accession : YP_321753.1
Strain : Anabaena variabilis ATCC 29413
Genome accession: NC_007413
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.25
Position : 1520450 - 1521163 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAGCATTAATACTTCCGAACCTGTAATTTCCATTCAAAACCTCGACCATTACTTTGGTAGTGGACAACTCCGCAA
ACAGGTTTTATTTAATATCAACCTCGAAATTAATGCAGGCGAAATAGTGATTATGACAGGGCCTTCCGGTTCTGGAAAAA
CTACCCTACTAACTTTAGTTGGTGGCTTGCGTTCAGCCCAGTCTGGTAATTTGCGGATTTTAGGTAGTGAACTCTGCGGT
GCTAGTAGTAAACAGTTGACTCAAGCACGACGCAACAACGGTTATATATTCCAAGCGCATAACCTACACGGTAGCCTAAC
AGCACTGCAAAATGTGCGGATGGGTTTGGAATTGCAACCAGGAATTTCCACCCAAGAAATGCTCACTCGCTCAACAGCAA
TGTTAGAAGAAGTCGGCTTAGGAAATCGGCTGAATTATTACCCAGATAACTTATCGGGAGGACAAAAACAAAGGGTAGCG
ATCGCTCGTGCTTTAGTCAGTCAGCCTAAAATAGTCTTAGCTGATGAACCAACAGCCGCACTAGATAAACAATCAGGGCG
CGATGTCGTGGAATTAATGCAAAAATTAGCCAAAGAGCATCACTGTACAATTCTGCTAGTTACCCACGACAACCGCATTT
TAGACATCGCTGATCGCATTGTCTACATGGAAGATGGTCATCTTGTCAAGGACGAGGTGAGTGTCAATAAATGA

Protein sequence :
MQSINTSEPVISIQNLDHYFGSGQLRKQVLFNINLEINAGEIVIMTGPSGSGKTTLLTLVGGLRSAQSGNLRILGSELCG
ASSKQLTQARRNNGYIFQAHNLHGSLTALQNVRMGLELQPGISTQEMLTRSTAMLEEVGLGNRLNYYPDNLSGGQKQRVA
IARALVSQPKIVLADEPTAALDKQSGRDVVELMQKLAKEHHCTILLVTHDNRILDIADRIVYMEDGHLVKDEVSVNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-23 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_1234 YP_321753.1 ABC transporter-like protein NC_012469.1.7685735. Protein 9e-27 44
Ava_1234 YP_321753.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-25 43
Ava_1234 YP_321753.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-25 42