Gene Information

Name : Ava_B0152 (Ava_B0152)
Accession : YP_320053.1
Strain :
Genome accession: NC_007410
Putative virulence/resistance : Virulence
Product : transport system permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 170916 - 171971 bp
Length : 1056 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACTAAGGAGATTTCAAAAAACACGCTATCAACTATTAATAATTAGCTTAATTATTATACTTATTATCTCCATTAC
GTTAGCTGTGATGATTGGGCCAGTACCAATCCCGCCTTTAAGAGTCTGGCAAATAGCACTTGCCCAATTATTCCCCAATT
TAACAGGAGATTGGACACCTGCACAGGTGCAAATTGTGTGGTTAATTCGCTTCCCGCGTGTGCTGTTGGCTTTTTTTGTC
GGTGCTGGACTGTCGGTGGTGGGTGTGACAATGCAGGCTTTGGTGCGAAATTCCCTGGCTGATCCTTATATCCTTGGCGT
TTCCTCTGGTGCGTCGGTGGGGGCTGTGTTGGTTATTTTGTTTGGGGTTTTCGCTTCACTGGGGATATATGCGGTATCTG
TGGGGGCGTTTCTGGGGGCGATGTTGTCGTTTGTCGTGGTTTTTTTGTTGGCGCAGCGTCAGGGAAGGATTTCTTCGACT
CGGTTAATTTTAGCTGGTGTGGCGATATCTTACTTATTCTCTGCCGTTACCAGTTTTTTGACGTTGAAAGCTGGTAGTGG
TGATGCGGCGCGGCGAGTATTATTTTGGTTATTGGGGGGACTGTCGGGGACAAAGTGGGCTGATTTGATTTTACCGATGG
GATCTCTGGGAATCGGGATGGTGTACTTATTATTGCAGAGGCGATCGCTCAATGCTTTACTCATCGGTGAAGAAACAGCA
ATGACTTTGGGAACAGATAGCGATCGCTTCCGTAAGCAGTTATTTTTGGTAACATCACTCTTAACTGGGGTGATGGTGGC
TGTAAGTGGGGCGATTGGTTTTGTGGGTTTAATGATACCTCATAGCGTCCGCTTACTCGTTGGTTCAGATCATCGCCGCG
TCCTACCTGTAAGCCTGTTACTAGGGGGAATTTTCCTGATTTTGGCAGATGTATTAGCACGCATGATTATTGCCCCAGAG
GAATTACCTATCGGTATTATTACGGCACTTTTCGGTACTCCCTTTTTCATTTGGTTGATGCAGCTTTCTCCAAAAATATT
AGGAGGGGGACGATGA

Protein sequence : 
MKLRRFQKTRYQLLIISLIIILIISITLAVMIGPVPIPPLRVWQIALAQLFPNLTGDWTPAQVQIVWLIRFPRVLLAFFV
GAGLSVVGVTMQALVRNSLADPYILGVSSGASVGAVLVILFGVFASLGIYAVSVGAFLGAMLSFVVVFLLAQRQGRISST
RLILAGVAISYLFSAVTSFLTLKAGSGDAARRVLFWLLGGLSGTKWADLILPMGSLGIGMVYLLLQRRSLNALLIGEETA
MTLGTDSDRFRKQLFLVTSLLTGVMVAVSGAIGFVGLMIPHSVRLLVGSDHRRVLPVSLLLGGIFLILADVLARMIIAPE
ELPIGIITALFGTPFFIWLMQLSPKILGGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-32 42
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-32 42
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 4e-32 42
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 9e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ava_B0152 YP_320053.1 transport system permease protein VFG0922 Protein 4e-35 41