|
Name : rph (Nwi_0193) Accession : YP_316813.1 Strain : Nitrobacter winogradskyi Nb-255 Genome accession: NC_007406 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 223063 - 223776 bp Length : 714 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGACCTAGCCGTCGTGCACCGGATGAACTGCGCGCCGTGTCGCTGGAACGAGGCGTGGTCAAATACGCCGAAGGCTC CTGCTTGGTGAAGTTCGGCGATACCCATGTGCTGGTCACCGCGACGCTCGAGGAGCGGCTGCCGCCATGGCTCAAGGGCC AGGGCCGGGGCTGGGTGACGGCCGAATACGGAATGCTGCCTCGCGCCACGCTGGAGCGGACCCGGCGCGAGGCCTCCGCC GGCAAGCAGGGCGGCCGGACCGTCGAAATCCAGCGCCTGATCGGCCGTTCCCTGCGGGCCGCGGTCGATCTCGAGGCGCT CGGCGAGCGCCAGATCACGATCGATTGCGACGTCATTCAGGCCGACGGCGGCACGCGCACCGCGTCGATCACCGGCGCCT GGGTCGCGCTGGCCGACTGCGTCAACTGGATGAAGGCCCGCAACATGCTCAAGGCCGGCGTGCTTCGAGGCAATGTCGCG GCGATCTCCTGCGGCATCTACAACGGCACGCCTGTCCTCGATCTAGACTATGCCGAGGATTCGGAAGCCGATACAGACGC AAACTTCGTGATGACCGGCGAAGGACGCATCATCGAGGTGCAGGGAACCGCCGAAAAGGTGCCTTTCTCCGATGATGAGT TTCTCGCGCTGATGGCGCTGGCGAAAAAAGGGGTCGCGCGGCTGGTGGATTTGCAGAAAATGGCGGTGGCGTGA Protein sequence : MRPSRRAPDELRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEERLPPWLKGQGRGWVTAEYGMLPRATLERTRREASA GKQGGRTVEIQRLIGRSLRAAVDLEALGERQITIDCDVIQADGGTRTASITGAWVALADCVNWMKARNMLKAGVLRGNVA AISCGIYNGTPVLDLDYAEDSEADTDANFVMTGEGRIIEVQGTAEKVPFSDDEFLALMALAKKGVARLVDLQKMAVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 7e-49 | 50 |
