Gene Information

Name : Nwi_1572 (Nwi_1572)
Accession : YP_318185.1
Strain : Nitrobacter winogradskyi Nb-255
Genome accession: NC_007406
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1720430 - 1721335 bp
Length : 906 bp
Strand : -
Note : -

DNA sequence : 
ATGATCGCCTTCATCGACGGTCACCGAGAGGTCCACGGGGTCGAGCCGATCTGCAGGGTGCTGCCGATCGCCCCCTCGAC
CTACCATGACGACCTCGCCAAGCGCGCCGATCCCACGAAGCTGTCGGCAAGGGCAAAGCGGGACCTGAGGCTGAAGCCTG
AGATCGAGCGCGTCTTCGTCGAGAACTTCGAGGTCTATGGCGTGAGGAAGGTCTGGCGGCAGCTGAACCGGGAGAACATC
CCGGTTGCTCGCTGCACCGTCGAGCGCCTGATGGCTGATCTCGGCCTGCAGGGCGTCATCCGCGGCAAGCCGATCCGCAC
GACCGTGCAGGACAAGGCAGCTCCGTGCCCGCTCGATCACGTGAACCGGGTCTTCCACGCGCCAGCTCCAAACATGTTGT
GGCTATCCGACTTCACCTACGTGAGCACCTGGTCGGGCTTCGTCTATGTCGCCTTCGTGATCGATGCCTATGCTCGCAGG
ATCGTCGGCTGGCGCGTCAGCCGCGCAGCTCATGCCGCCTTCGTGTTGGACGCCTTGGAGCAGGCGCTGCATGAACGGCG
CCCCGCCAGCAAGGCTGGTCTCGTCCATCACTCGGATCGCGGTTCGCAATACGTCAGCATCCGCTACACCGAGCGCCTGG
CCGAGGCGGGCATCGAGCCTTCGGTCGGCAGCGTCGGCGACAGCTACGACAACGCGCTCGCCGAAACGATCAACGGTCTA
TACAAGGCCGAGGTCATCCATCGGCGCGGGCCGTGGCGGAGCTTCGAGGCGGTCGAGTTCGCCACACTCGCCTGGGTCGA
CTGGTTCAACCATCGCCGGCTGCTGGAGCCCATCGGCAACATCCCGCCGGCCGAAGCCGAGGAGCGCTACTACGCCATGC
TCGACGAGACAGCCATGGCGGCGTGA

Protein sequence : 
MIAFIDGHREVHGVEPICRVLPIAPSTYHDDLAKRADPTKLSARAKRDLRLKPEIERVFVENFEVYGVRKVWRQLNRENI
PVARCTVERLMADLGLQGVIRGKPIRTTVQDKAAPCPLDHVNRVFHAPAPNMLWLSDFTYVSTWSGFVYVAFVIDAYARR
IVGWRVSRAAHAAFVLDALEQALHERRPASKAGLVHHSDRGSQYVSIRYTERLAEAGIEPSVGSVGDSYDNALAETINGL
YKAEVIHRRGPWRSFEAVEFATLAWVDWFNHRRLLEPIGNIPPAEAEERYYAMLDETAMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 2e-73 65
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 6e-59 64
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 1e-62 64
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 5e-62 63
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 7e-81 62
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 7e-81 62
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 7e-81 62
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 4e-81 62
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-80 62
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-83 62
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-83 62
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-83 62
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-83 62
Z1198 NP_286733.1 transposase Not tested TAI Protein 3e-81 62
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 4e-83 62
Z1638 NP_287141.1 transposase Not tested TAI Protein 3e-81 62
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-81 62
Z1221 NP_286756.1 transposase Not tested TAI Protein 9e-82 62
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-57 62
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 5e-82 61
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 6e-82 61
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 1e-79 60
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 3e-54 47
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 2e-39 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwi_1572 YP_318185.1 integrase catalytic subunit VFG1602 Protein 8e-80 60