Gene Information

Name : Nwi_1187 (Nwi_1187)
Accession : YP_317801.1
Strain : Nitrobacter winogradskyi Nb-255
Genome accession: NC_007406
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1292649 - 1293320 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence :
TTGCGCCTTCTCGTCGTCGAGGATGATCCCGATCTCAATCGTCAGCTCACGACAGCGCTGACCGACGCCGGCTACGTCGT
CGATCGCGCGTTCGACGGCGAGGAGGCGCATTTCCTCGGTGACAGCGAACCTTATGACGCGGTGGTGCTGGACATCGGCC
TGCCGAAGATGGACGGCATTTCCGTGCTGGAAGCCTGGCGGCGGGGGGGCCGCACCATGCCGGTCCTGATTCTCACCGCG
CGGGATCGCTGGAGCGACAAGGTGCAGGGGTTCGACGCCGGCGCTGACGACTATGTTGCGAAACCCTTCCATCTGGAGGA
AATCCTGGCGCGGATGCGCGCGCTGCTGCGACGGAGCACGGGGCACGCGCACTCCGAACTGACCTGCGGGCCGGTGACGC
TGGATACCCGCACGGGCCGCGTCAGCGTCGGCGGCAATCCGGTCAAGATGACGTCGCATGAATACCGGCTGCTGGCCTAC
CTCATGCACCATATCGGCCGGGTCGTGTCGCGCACCGAACTGGTCGAACATCTTTACGATCAGGATTTCGATCGTGACTC
CAACACAATCGAAGTGTTTGTCGGCCGTATTCGCAAGAAGCTGGACGTCGATATCATCCAGACGGTACGCGGGCTCGGCT
ATCTGCTCACGCCGCCGGCAGATGCGCGTTAG

Protein sequence :
MRLLVVEDDPDLNRQLTTALTDAGYVVDRAFDGEEAHFLGDSEPYDAVVLDIGLPKMDGISVLEAWRRGGRTMPVLILTA
RDRWSDKVQGFDAGADDYVAKPFHLEEILARMRALLRRSTGHAHSELTCGPVTLDTRTGRVSVGGNPVKMTSHEYRLLAY
LMHHIGRVVSRTELVEHLYDQDFDRDSNTIEVFVGRIRKKLDVDIIQTVRGLGYLLTPPADAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwi_1187 YP_317801.1 two component transcriptional regulator NC_002516.2.879194.p Protein 9e-46 49
Nwi_1187 YP_317801.1 two component transcriptional regulator CP000647.1.gene1136. Protein 8e-41 46
Nwi_1187 YP_317801.1 two component transcriptional regulator CP004022.1.gene1005. Protein 9e-43 46
Nwi_1187 YP_317801.1 two component transcriptional regulator BAC0530 Protein 7e-41 46
Nwi_1187 YP_317801.1 two component transcriptional regulator BAC0487 Protein 1e-34 44
Nwi_1187 YP_317801.1 two component transcriptional regulator CP001918.1.gene2526. Protein 1e-39 44
Nwi_1187 YP_317801.1 two component transcriptional regulator CP001138.1.gene1939. Protein 3e-41 44
Nwi_1187 YP_317801.1 two component transcriptional regulator CP000034.1.gene2022. Protein 5e-41 43
Nwi_1187 YP_317801.1 two component transcriptional regulator BAC0638 Protein 4e-32 43
Nwi_1187 YP_317801.1 two component transcriptional regulator NC_002695.1.913289.p Protein 2e-40 43
Nwi_1187 YP_317801.1 two component transcriptional regulator BAC0125 Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwi_1187 YP_317801.1 two component transcriptional regulator VFG1390 Protein 4e-34 44
Nwi_1187 YP_317801.1 two component transcriptional regulator VFG0475 Protein 3e-41 44
Nwi_1187 YP_317801.1 two component transcriptional regulator VFG0473 Protein 7e-33 42
Nwi_1187 YP_317801.1 two component transcriptional regulator VFG1389 Protein 9e-31 41