Gene Information

Name : Tbd_0842 (Tbd_0842)
Accession : YP_314600.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.-
Position : 891010 - 892290 bp
Length : 1281 bp
Strand : +
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
TTGTTTTGCCTTGAATTTACCCACTGGGAAATCGCCGTGACGGCCGACAAGAAGCCCCGCTTACGCACCATCCAGAAATC
GACCAAGCTCGACAACGTCTGCTACGACATCCGCGGGCCGGTCATGGCGCGCGCGCGCCAGATGGAGGAGGAGGGGCAGC
GCATCATCAAGCTGAACATCGGCAATCCTGCGCCGTTCGGCTTCGAGGCGCCCGAGGAGATCGTGCAGGACGTGATCCTC
AACCTGCCCAATGCCTCCGGCTACAGCGATTCGAAGGGCCTGTTCGCCGCGCGCAAGGCGATCATGCACGAAACCCAGCG
CAAGGGCATCGCCGGCGTGACGATCGACGACATCATCGTCGGCAACGGCGTGTCCGAACTGATCGTGATGGCGATGCAGG
CGCTGCTCAACAACGGCGACGAGGTGCTCGTGCCGGCGCCTGACTACCCGCTGTGGACGGCGGCCGTCAGCCTCGGCGGC
GGTAAGCCGCGCCACTACCTGTGCGACGAGGGCGCCGGCTGGCTACCCGACCTCGACGACATCCGCGCCAAGATCACGCC
CAGCACGCGCGCCATCGTCATCATCAACCCCAACAATCCGACCGGCGCGCTCTACCCGACCGAATTGCTGCGCGAAATCC
TCGAAATCGCGCGCCAGCACCAACTCATCGTCTACGCCGACGAAATCTACGACAAGGTGTTGTTCGACGGCGTCGTCCAC
ACCTCGATCGCCTCGCTCGCCGACGATCTCCTGATCGTCACGTTTAACGGCCTGTCGAAGAACTACCGTGCCTGCGGCTA
CCGCTCGGGCTGGCTCGTCGTCTCCGGCGACAAGCGCCACGCCAAGGATTATCTCGAAGGCCTCAACATGCTCGCGTCGA
TGCGGCTGTGCTCGAACGTGCCCGGCCAGCATGCGATCCAGACCGCGCTCGGCGGCTACCAGAGCATCAACGACCTCGTC
GCGCCGAGCGGGCGGCTGACGCGGCAGCGCGACCTCGCGCACGAACTCCTGACGCTGATTCCGGGCGTGAGCTGCGTCAA
GCCCAAGGCCGCGATGTACCTGTTCCCGCGGCTCGACCCCAAGCTCTACCCGATCCACGACGACCAGAAGTTCATCCTCA
ATCTGCTCGAGGAAGAGCGCGTGCTCGTCGTGCAGGGCACGGGCTTCAACTGGCCGCGGCCCGATCATCTGCGCGTCGTG
TTCCTGCCGCACGAAGAGGATTTGACCGAGGCGATCGGACGCATGAGCCGTTTCCTCGATCGCCAGCGCGCGCATCGCTG
A

Protein sequence :
MFCLEFTHWEIAVTADKKPRLRTIQKSTKLDNVCYDIRGPVMARARQMEEEGQRIIKLNIGNPAPFGFEAPEEIVQDVIL
NLPNASGYSDSKGLFAARKAIMHETQRKGIAGVTIDDIIVGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLGG
GKPRHYLCDEGAGWLPDLDDIRAKITPSTRAIVIINPNNPTGALYPTELLREILEIARQHQLIVYADEIYDKVLFDGVVH
TSIASLADDLLIVTFNGLSKNYRACGYRSGWLVVSGDKRHAKDYLEGLNMLASMRLCSNVPGQHAIQTALGGYQSINDLV
APSGRLTRQRDLAHELLTLIPGVSCVKPKAAMYLFPRLDPKLYPIHDDQKFILNLLEEERVLVVQGTGFNWPRPDHLRVV
FLPHEEDLTEAIGRMSRFLDRQRAHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 6e-114 58
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-114 58
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-114 58
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-114 58