Gene Information

Name : Tbd_0469 (Tbd_0469)
Accession : YP_314227.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : 3.6.1.-
Position : 491230 - 493266 bp
Length : 2037 bp
Strand : -
Note : -

DNA sequence :
TTGAAGACGGCTTCGCCGTTTTCCTTTCCGGTCAGTCCGGCGCTTGCGGCCAAGCTCGCCAAGCTCGGTCTCAAGCGCGA
CAGCGACCTGATCCTCCACCTGCCGCTGCGCTGGGAAGACGAAACGCGGATCACGCCGATCGGCGAACTGCTGCCGGGAC
AGACCGCGCAGGTGCAGGCCTGCGTGCGCGAAGCGAAGGTCACCTATCGTCCGCGGCGCATGCTGACGCTGATCGTCGAG
GACGACAGCGGCGTGCTCGGCGTCCGCTTCCTGCACTTCTATCCCAGCCACCTCAAGGCGTTCCAGGCCGGGGCGCGCTT
CCGCTTCAATGGCGAAGTCCGCGGCGGCTTCCTCGGTCTGGAGATGGTGCACCCGCGTTTCGCCAAGGCCGACGACGACA
CCCCGCTGCCGGCCGGGCTGACGCCGGTCTACCCGACGACCGCCGGACTCGGCCAGGCGAGCCTGCGCAAGCTGATCGAG
CGCGCGCTCGCCGCGCCCATCGATGAGACGCTGCCGCCCGAATGGCGCGAAGAACTGGGCCTCGCGGAACTGGAATCGAG
CATCCGCCTGCTGCACCAGCCGCCGCCCGGCTGCGCGCAGCATGCGCTCGAATCGCGCGCCCACCCCGCCTGGCAGCGGC
TCGCCTTCGACGAACTGCTGGCGCAGCAGCTGTCGCTGGCGACGTCCCGCCAGGCGCGCGAGGCGCGCACGACTTTGCCG
CTTCCGCACCGGCGCCGCCTGACCGCGGCCTTCGTCGACACCCTCGCTTTCGAACTGACCGCGGCGCAGGCCCGCGCCTG
GCAGGAAATCAGTACCGACCTCGCCGCGCCGCATCCGATGCGCAGGCTGCTGCAGGGCGACGTCGGCAGCGGCAAGACCG
TGGTCGCGGCGCTCGCCTGCCTGCAGGCAGTCGAGAACGGCATGCAGGCCGCGTTCATGGCGCCGACCGAGATCCTGGCC
GAGCAGCACTACCGCAAGCTCGCGCCGACGCTTGCGGCGCTCGGCGTGCGCAGCGGGTGGGTTTCGGGCAGCCAGCGCCG
TGCCGAACGCGAAGCCGCGTGGCGCGCGATCGCCGCCGGGGAGGCCGACCTCGCCTTCGGCACGCATGCCCTGTTCCAGG
AGGCCGGAAACTTTTGCCGGCTCGGCCTCGTCGTCGTCGACGAACAGCACCGCTTCGGCGTCGGCCAGCGCCTTGCGCTG
ATGGGCAAAGGCACCGAGCCGCACCAGTTGATGATGAGCGCGACGCCGATTCCACGCACGCTCGCGATGAGCTTTTTCGC
CGACCTCGACGTCTCGGCCATCGACGAACTCCCGCCCGGGCGCACGCCGATCGTGACCAAGCTGGTCAGTGCCGCGCGCC
GCGACGAGGTGCTCGCCCGTGTGCGCGACGCCTGTGTGGGCGGCGGACAGGCCTACTGGGTGTGCCCGCTGATCGAGGAA
TCGGAGAAGCTGCAGCTGCAGACCGCCGAGGACACCTACGGCACGCTCGTCGAGCAGCTGCCCGGGCTGCGCATCGGCCT
CGTGCACGGCCGGCTCAAGGCCGAGGACAAGCAATCGGTCATGGCGGCGTTCCAGTCTCACGAGATCGACCTGCTCGTCG
CGACGACCGTGATCGAGGTCGGCGTCGACGTGCCCAACGCGGCGCTCATGGTGATCGAGCACGCAGAGCGCATGGGGCTC
GCGCAATTGCATCAGTTGCGCGGGCGGGTCGGGCGCGGCGCCCGCGAATCGGTGTGCGTGCTGTTGTACGAGACGCCGCT
GTCCGAACTCGCGCGGGCGCGGCTCAAGGTGATTTTCGAACACAGCGACGGCTTCGAGATCGCGCGCCAGGATCTGCTGC
TGCGCGGACCGGGCGAGTTGCTCGGCCAGCGGCAGAGCGGTCTGCCGATGCTGCGTTTCGCCGACCTCGAGCGCGATGTC
GCCTTGCTCGAGCGCGCGCGCGACCTCGCGCAACGCTGCCTGCGCGAGCGCCCCGAGGTCGCCGCGCGCCACGTCGAGCG
CTGGCTCGGAAGCCGCCAGGCCTACAGCGGAAGCTGA

Protein sequence :
MKTASPFSFPVSPALAAKLAKLGLKRDSDLILHLPLRWEDETRITPIGELLPGQTAQVQACVREAKVTYRPRRMLTLIVE
DDSGVLGVRFLHFYPSHLKAFQAGARFRFNGEVRGGFLGLEMVHPRFAKADDDTPLPAGLTPVYPTTAGLGQASLRKLIE
RALAAPIDETLPPEWREELGLAELESSIRLLHQPPPGCAQHALESRAHPAWQRLAFDELLAQQLSLATSRQAREARTTLP
LPHRRRLTAAFVDTLAFELTAAQARAWQEISTDLAAPHPMRRLLQGDVGSGKTVVAALACLQAVENGMQAAFMAPTEILA
EQHYRKLAPTLAALGVRSGWVSGSQRRAEREAAWRAIAAGEADLAFGTHALFQEAGNFCRLGLVVVDEQHRFGVGQRLAL
MGKGTEPHQLMMSATPIPRTLAMSFFADLDVSAIDELPPGRTPIVTKLVSAARRDEVLARVRDACVGGGQAYWVCPLIEE
SEKLQLQTAEDTYGTLVEQLPGLRIGLVHGRLKAEDKQSVMAAFQSHEIDLLVATTVIEVGVDVPNAALMVIEHAERMGL
AQLHQLRGRVGRGARESVCVLLYETPLSELARARLKVIFEHSDGFEIARQDLLLRGPGELLGQRQSGLPMLRFADLERDV
ALLERARDLAQRCLRERPEVAARHVERWLGSRQAYSGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-100 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_0469 YP_314227.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-134 53