Gene Information

Name : Tbd_2740 (Tbd_2740)
Accession : YP_316498.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 2821011 - 2823080 bp
Length : 2070 bp
Strand : -
Note : -

DNA sequence :
ATGGACGAACACGCCAACGACGCAAGGGCGGTTGCCACGCACGCGGCCGCGAGTCACGTGCACCCGTCGCCGCATGGGGG
CGGCGCGCACGCCGGGCACGGCGTCGCGCATGGCGGCCACGCCGATCACGCGCGCATGGTCAGCGACTTCAGGACCCGCT
TCTGGGTCGCGCTCGTGCTGACGCTGCCCATTCTGGCCTTGTCGGCCGACCTCTGGGACATGCTCGGCCTTGCCGCCCCG
CTGCGCTTTCGCGGCGATCGCTACGTTCTGTTCCTGTTTTCCAGCGTCGTCTACTTCTACGGCGGCTGGCCGTTCCTCCG
CGGCTTCGGCGACGAACTGCGGCAACGCAGGCCCGGCATGATGACGCTGATCGCGGTGGCGATCAGCGCGGCCTACTTCT
ATTCGAGCGCGGTGACCTTCGGCCTGCCGGGCATGGGCTTCTATTGGGAGCTCGCGACCCTGATCGACATCATGCTGCTC
GGCCACTGGATCGAAATGAAGTCGGTGCTCGGCGCGTCGGGGGCGCTCGAGGCGCTGGTGCGGTTGCTGCCCGCCCAGGC
GCACCGCCTCGGGCCGGAAGGGCAAAGCGAGGACATCCCGGTCGGCGACATCGCGCCCGGCGACCGCATCCTGGTCAAGC
CCGGCGAACGCGTGCCGACCGACGGCATCATCGTCGCGGGCGAGACGAGCCTCGACGAATCGATGCTGACGGGCGAGTCG
AAGCCGGTCGAGAAAGGCGATGGCGCCGAAGCGATCGGCGGCTCGGTCAACGGCGCCGGTGCGATCACGCTCGAGGTCCG
CAAAACCGGCGGCCAGACCTATCTGTCGCAGGTCATGGACCTGGTGCGCCGCGCGCAGGAATCGCGCTCGCGCACCCAGG
ACCTGGCCAACCGCGCTGCGCAGTGGCTGACCGCGATCGCGCTCGGCGGCGGCCTCGCGACGCTGTTCGCGTGGCTCGCG
CTCGGCCGTGACTTCGCCTTCGCGATGGAGCGCGCAGTCACGGTGATGGTGATCGCCTGTCCGCACGCGCTCGGCCTGGC
CGTGCCGCTCGTCGTCGCGGTGAGCACGAGCATGTCGGCCTCGCACGGCCTGCTCGTCCGGGACCGTGCGGCGTTCGAGC
GCGCGCGCAAGCTCGACGCAGTCGTCTTCGACAAGACCGGCACGCTGACCGAAGGCCGCTTCGGCGTCGCCGACATAGTG
CTGCTGGCGGACCTCGACGAAGCCGCCGCGCTGCGTCTGGCCGCGGCGCTCGAGAGCCAGTCCGAGCACCCGATCGCGGC
GGGCATCGTGCGCGCGGCGAAGGAGCGCGGGCTCGCATGGCCGCCGGCCGACGCTTTCCGCAACCTCACCGGCCGCGGTG
CGCAGGCCACGGTCGAGGGCCGCGACGTCAAGGTCGTGAGTCCGGGCTACCTCCGCGAACACGGCATCGCGGCGCGCGAT
GCGCGGCTCGATGCGCTCGCCGCAGCGGGCAAGACCACGGTCTTCCTCGTCGTCGACGGAAGCGCGGTCGCGGCGTTCGG
ACTCGCCGACGTCGTCCGCGCCGAGTCGAAGGCGGCGGTCGCGCGGCTCAAGGCGATGGGCATGCAATGCATGATGCTGA
CCGGCGACTCGCGTGCGGTCGCGCAGACCGTCGCCGCGCAGCTCGGCCTCGACGACTATTTCGCCGAAGTGCTGCCCGAG
CAGAAAGCCGAAAAGATCCGCGAGGTGAAGGCCCGTGGACTCACCGTCGCGATGGTCGGCGATGGTGTCAACGACGCGCC
GGCGCTCGTCGAATCGGATCTCGGCGTCGCGATCGGCGCCGGCACCGACGTGGCGATCGAGGCCGCGGACATCGTGCTCG
TGAGCAACGACCCGCGCGACGTCGCCGCGATCCTTGGCCTGTCGCGCAAGACCTACGCGAAGATGATCCAGAACCTGCTC
TGGGCGACCGGCTACAACAGCTTCGCGATTCCGCTCGCGGCCGGGGTCGGCGCCGCCTGGGGCCTGCTGCTCACGCCTGC
GGTCGGGGCCGTGTTCATGTCGGCGAGCACCGTGATCGTCGCGATCAACGCCAAGTTACTACGGCCCTGA

Protein sequence :
MDEHANDARAVATHAAASHVHPSPHGGGAHAGHGVAHGGHADHARMVSDFRTRFWVALVLTLPILALSADLWDMLGLAAP
LRFRGDRYVLFLFSSVVYFYGGWPFLRGFGDELRQRRPGMMTLIAVAISAAYFYSSAVTFGLPGMGFYWELATLIDIMLL
GHWIEMKSVLGASGALEALVRLLPAQAHRLGPEGQSEDIPVGDIAPGDRILVKPGERVPTDGIIVAGETSLDESMLTGES
KPVEKGDGAEAIGGSVNGAGAITLEVRKTGGQTYLSQVMDLVRRAQESRSRTQDLANRAAQWLTAIALGGGLATLFAWLA
LGRDFAFAMERAVTVMVIACPHALGLAVPLVVAVSTSMSASHGLLVRDRAAFERARKLDAVVFDKTGTLTEGRFGVADIV
LLADLDEAAALRLAAALESQSEHPIAAGIVRAAKERGLAWPPADAFRNLTGRGAQATVEGRDVKVVSPGYLREHGIAARD
ARLDALAAAGKTTVFLVVDGSAVAAFGLADVVRAESKAAVARLKAMGMQCMMLTGDSRAVAQTVAAQLGLDDYFAEVLPE
QKAEKIREVKARGLTVAMVGDGVNDAPALVESDLGVAIGAGTDVAIEAADIVLVSNDPRDVAAILGLSRKTYAKMIQNLL
WATGYNSFAIPLAAGVGAAWGLLLTPAVGAVFMSASTVIVAINAKLLRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 9e-84 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_2740 YP_316498.1 heavy metal translocating P-type ATPase BAC0629 Protein 5e-178 64
Tbd_2740 YP_316498.1 heavy metal translocating P-type ATPase BAC0079 Protein 1e-120 46
Tbd_2740 YP_316498.1 heavy metal translocating P-type ATPase BAC0383 Protein 8e-95 42
Tbd_2740 YP_316498.1 heavy metal translocating P-type ATPase BAC0183 Protein 5e-75 42
Tbd_2740 YP_316498.1 heavy metal translocating P-type ATPase BAC0101 Protein 3e-79 42