Gene Information

Name : Tbd_2503 (Tbd_2503)
Accession : YP_316261.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Virulence
Product : L-glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 2575068 - 2576477 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGTGGCCGATGTGCTCAAGAGAATTCAGGACGACGAAGTGAAGTTCGTCGACCTGCGCTTCACCGATACGCGTGG
CAAGGAACAGCACGTTTCGATTCCTGCCCGCATCGTGACCGAGGACTGGTTCGAGGACGGCCATCCCTTCGACGGCTCCT
CGATCGCCGGTTGGAAAGGCATCCAGGCGTCCGACATGCTGCTCAAGGCCGATCCCGACTCGGCCTACATGGATCCCTTC
TTCGACGAGCCCACGCTGATCCTGACCTGCGACGTGATCGAGCCGTCCGACGGCAAGGGCTACGAGCGCGATCCGCGTTC
GGTCGCGCGTCGCGCCGAGGCCTACCTCAAGTCGACGGGGCTGGCCGATACGGCTTACTTCGGACCCGAGCCCGAGTTCT
TCATTTTCGATTCGATCACCTGGCACGACGACATGTCGGGCTCGGGCGTGAAGATCAATTCGGAGGAGGCCGCCTGGTCG
TCCGCCGAGAAGTTCGAGAACGGCAACACCGGCCACCGTCCGGGCATCAAGGGCGGCTACTTCCCGGTGCCGCCGGTCGA
CAGCCTGCAGGACATCCGCGCTGCGATGGTCGTTGCGCTGGAAGAAGCCGGCGTTCCGGTCGAAGTCTTCCACCACGAAG
TCGCGACCGCGGGCCAGTGCGAGATCGGGACCCAGTTCAGCACGCTGACCAAGCGCGCCGACTGGACGCAGGTTCTCAAG
TACATCGTGCACAACGTCGCCCACGCCTACGGCAAGACGGCGACCTTCATGCCCAAGCCCATCGTCGGCGACAACGGTTC
CGGCATGCACGTGCACATGTCGCTGTGGAAGGACGGCAAGAACACCTTCGCCGGCAACGGCTACGCCGGGCTGTCCGAGA
CCGCGCTCTATTACATCGGCGGCATCATCAAGCACGCCAAGGCACTGAACGCGATCACCAATCCGGGCACCAACTCGTAT
AAGCGTCTGGTGCCGGGCTTCGAAGCGCCGGTCATGCTGGCCTACTCGGCCCGCAACCGCTCGGCGTCGATTCGCATTCC
GATCGCTGCGAGCGAGAAGGCACGCCGCATCGAGGTTCGTTTCCCGGACCCGCTGGCCAACCCCTATCTGGCGTTCTCCG
CGCTGATGATGGCGGGCCTCGACGGCATCCAGAACAAGATCCACCCCGGCGACCCCGGCGATAAGGACTTGTACGACCTG
CCGCCCGAAGAGGATGCGAAGATTCCGAAGGTCTGCCACAGCCTCGAAATGGCACTCGACGAGCTCGACAAGGACCGCGA
GTTCCTGACTCGTGGCGGCGTGTTCACGAACGACATGATCGATGCCTACATCACGCTGAAGATGGAAGAGGTCACGAAGT
TCCGCATGACCACGCACCCGGTCGAGTTCGCGATGTACTACTCGCTGTAA

Protein sequence :
MAVADVLKRIQDDEVKFVDLRFTDTRGKEQHVSIPARIVTEDWFEDGHPFDGSSIAGWKGIQASDMLLKADPDSAYMDPF
FDEPTLILTCDVIEPSDGKGYERDPRSVARRAEAYLKSTGLADTAYFGPEPEFFIFDSITWHDDMSGSGVKINSEEAAWS
SAEKFENGNTGHRPGIKGGYFPVPPVDSLQDIRAAMVVALEEAGVPVEVFHHEVATAGQCEIGTQFSTLTKRADWTQVLK
YIVHNVAHAYGKTATFMPKPIVGDNGSGMHVHMSLWKDGKNTFAGNGYAGLSETALYYIGGIIKHAKALNAITNPGTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPIAASEKARRIEVRFPDPLANPYLAFSALMMAGLDGIQNKIHPGDPGDKDLYDL
PPEEDAKIPKVCHSLEMALDELDKDREFLTRGGVFTNDMIDAYITLKMEEVTKFRMTTHPVEFAMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-102 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_2503 YP_316261.1 L-glutamine synthetase VFG1399 Protein 2e-103 52