Gene Information

Name : Tbd_0229 (Tbd_0229)
Accession : YP_313987.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : 4.3.2.1
Position : 250631 - 252022 bp
Length : 1392 bp
Strand : -
Note : catalyzes the formation of arginine from (N-L-arginino)succinate

DNA sequence :
ATGAGCACGTCGTCGACGCCGCCGCAAGGCGCCTGGTCGGGCCGCTTTTCCGAGCCTGTTTCCGAAATCGTCAAACGCTA
CACGGCGTCGATTCCTTTTGATTATCGGCTCGCCGAGTTCGATATTCAGGGCTCGCTCGCGCACGCGGCGATGCTGCACC
ACGTCGGCGTCCTGAGCGCCGACGACCTCGCGGCGATCCGCGGCGGCATGGGCGAGCTGCTCGAAGAGATACGCGCCGGG
CGCTTCGCCTGGTCGCTGGATAAGGAGGATGTGCACCTCAACATCGAGGCGGCGCTGACGGCGAAGATCGGCGACGCCGG
CAAGCGCCTGCACACCGGACGCAGCCGCAACGATCAGGTCGCGACCGACATCCGGCTCTATCTGCGCGACGCGATCGACC
GCATCCTCGCGGGCCTCAAGGCGTGCCAGACCTCGCTCGTCGACCTTGCCGAGGCGCACGCCGACACCGTAATGCCGGGC
TTCACCCACCTGCAGGTCGCGCAGCCGGTGACCTTCGGCCACCATCTTCTCGCCTATTTCGAGATGCTCGCCCGCGACGC
CGAGCGCATGGCCGACTGCCGACGGCGCGTCAACCGCCTCCCGCTCGGCGCCGCGGCGCTCGCGGGCACGAGCTACCCCA
TCGATCGCGCCTACGTCGCGCGCGAACTCGGCTTCGAGGCCGTGTGCGAGAACTCGCTCGACGCCGTCTCCGACCGCGAC
TTCGCGATCGAATTCGCGGCCGCGGCGGCGCTCGTGATGACGCATCTGTCGCGCCTCTCGGAAGAACTGATCCTGTGGAT
GAGCCCGCGCTTCGGCTTCATCGACCTTGCCGACCGCTTCTGCACCGGCTCGTCGATCATGCCGCAGAAGAAGAATCCTG
ACGTGCCCGAACTCGTGCGCGGCAAGACCGGGCGGGTCAACGGCCACCTCGTCGCGTTGCTGACCCTGATGAAGGGCCAG
CCGCTCGCATACAACAAGGACAATCAGGAAGACAAGGAACCGCTATTCGATACGGTCGACACCCTGGCCGACACGCTTGC
GATCTACGCCGACATGCTGCGCGGCGTGACGGTCAAGCCCGACGCGATGCACGCGGCCGTGATGCAAGGCTTCGCGACCG
CCACCGACCTCGCCGACTACCTGGTCAAGAAAGGCCTGCCCTTCCGCGATGCGCACGAAGTCGTTGCGCGTGCCGTGCGC
GTCGCCGACGAATCCGGGCGCGACCTGGCCGACTTGCCGCTCGACGAACTGCAGACGTTCAGCCCGATCATCGGCGACGA
CGTCTACGCACTATTGACCCTCGAAGGCTCGCTCGCCGCCCGCGACCATTTCGGCGGCACCGCGCCCGCGCAGGTCCGCG
CAGCGGTCGCGCGCGCCCGCGGGCGACTTTAA

Protein sequence :
MSTSSTPPQGAWSGRFSEPVSEIVKRYTASIPFDYRLAEFDIQGSLAHAAMLHHVGVLSADDLAAIRGGMGELLEEIRAG
RFAWSLDKEDVHLNIEAALTAKIGDAGKRLHTGRSRNDQVATDIRLYLRDAIDRILAGLKACQTSLVDLAEAHADTVMPG
FTHLQVAQPVTFGHHLLAYFEMLARDAERMADCRRRVNRLPLGAAALAGTSYPIDRAYVARELGFEAVCENSLDAVSDRD
FAIEFAAAAALVMTHLSRLSEELILWMSPRFGFIDLADRFCTGSSIMPQKKNPDVPELVRGKTGRVNGHLVALLTLMKGQ
PLAYNKDNQEDKEPLFDTVDTLADTLAIYADMLRGVTVKPDAMHAAVMQGFATATDLADYLVKKGLPFRDAHEVVARAVR
VADESGRDLADLPLDELQTFSPIIGDDVYALLTLEGSLAARDHFGGTAPAQVRAAVARARGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 7e-135 64
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 7e-135 64