Gene Information

Name : Tbd_1808 (Tbd_1808)
Accession : YP_315566.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Unknown
Product : phage integrase site specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1911396 - 1912454 bp
Length : 1059 bp
Strand : +
Note : -

DNA sequence :
ATGGCAACAATCCGTAAAAGAGGCGAATTGCAGTGGCAGGCCATCGTCAAACGGAAAGGCTACCCTCTGCAATCCAAAAC
CTGGAACACTCGCAAAGAGGCCGAAGCTTGGGCGCGGCAGATTGAAAGCGAGATGGATCGCGGTGTCTTCGTCAGCCGCG
CCGAGGTGGAGCGGACGACGCTGCAGGATCTGATCGGGCGGTATCGCATCGAAGTGCTGCCAAACAAGCGTGGCAAGCAC
TTCGGCCCGGCCCTGAGGGTGCTGGAACAGCACCTGGGGAAATATTCGCTCGCCGCGCTGTCGCCGAAGCTCATCGCCGG
CTTCCGTGACAAGAGAACGAAAGCCGGTCTGTCAGCATCGACGGTCAAGAAAGAAATCAATCTGCTCTCGAAGTTGATCG
ACCTGGCCGGTAAAGAATGGGGGGTCGCGTTGCCCGCGAACCCCTGCGCGATGGTCTCCAGGCCGGTCGAGAAAAACGCC
AGGGACCGCCGCCTGCAGCCGGAGGAAGAAAAGTATCTGCTGACCGCTTGCGAACAGCACGTCGCGCTCCTCTCCCGCTT
TGCGCTTGAGACCGCCGCGCGCTTGGGCGAGCTGCTTGCGCTACGCTGGGCAGACGTTGACACGACGAAGCGGGTGATGG
TGATTCGGGGCATAGACGAGCGCGGCACAAAGTCGGGCGATGCGCTCCGTGCTGTCCCTTTGTCGCCTGCCGCGGTTTCC
GTGCTGGATGAACTGAAGAAGCTACCGCGAGGGATCGACGGCCGAGTGTTTTACTGGTGGAAAGCGTCCGACAGTTTTAG
CAAGACGTGGGGGCGCGCATTGACGCGGGCGCACGCCTCGTACATCGCCGACTGCGAGAAGGCCGGGGGGGAGCCGGACC
AAGCATTTCTGATAGACCTGAGGTTCCACGATCTACGCCATGAGGCAACGTCACGCCTGTTCGAAAAAGGCGTGTTCGAC
AGCATGGAGGTCGCCAGCATCACGGGGCACAAGACCCTCGCCATGCTCAAGCGGTATACGCACCTGCGGGCTGAAGATTT
GGCGAAGAAGCTGGGCTAG

Protein sequence :
MATIRKRGELQWQAIVKRKGYPLQSKTWNTRKEAEAWARQIESEMDRGVFVSRAEVERTTLQDLIGRYRIEVLPNKRGKH
FGPALRVLEQHLGKYSLAALSPKLIAGFRDKRTKAGLSASTVKKEINLLSKLIDLAGKEWGVALPANPCAMVSRPVEKNA
RDRRLQPEEEKYLLTACEQHVALLSRFALETAARLGELLALRWADVDTTKRVMVIRGIDERGTKSGDALRAVPLSPAAVS
VLDELKKLPRGIDGRVFYWWKASDSFSKTWGRALTRAHASYIADCEKAGGEPDQAFLIDLRFHDLRHEATSRLFEKGVFD
SMEVASITGHKTLAMLKRYTHLRAEDLAKKLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13530.1 site-specific recombinase Not tested PAGI-8 Protein 1e-50 41