Gene Information

Name : Tbd_1760 (Tbd_1760)
Accession : YP_315518.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1853501 - 1854181 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGAAACCGTGCTGCGCTGCAGCGGGCTCGGCAAGACATTCCGCCAGGGCAAGGTCGACGTGCCGGTGCTGCGTTC
GGTCGACCTTGCGGTCGGCACCGCGGAGTCGCTCGCTATCGTTGGCGCGTCGGGTTCCGGCAAGAGCACCTTGCTGCATC
TTCTCGGCGGACTCGACACGCCGACGCGCGGCGACGTCGCGCTTCTCGGAAAAAACCCGTTCGCGCTTTCGGAGGCCGAG
CGCTGCAGGCTGCGCAACACCGCACTCGGCTTCGTCTATCAGTTTCATCATCTGCTGCCGGAATTTTCGGCGGTGGAAAA
TGCGGCGATGCCGCTCATCATCCGGCGCGTCGCGCGTGCGGAGGCCTTGGCGCGCGCCGCGGAAGTGCTCGACGCGGTCG
GGCTGACGCATCGCCTCGCTCATCGCCCCGGTGAACTGTCGGGCGGCGAGCGTCAGCGGGTCGCGATCGCGCGTGCGGTC
GTGACACGTCCGGCATGCATCCTCGCGGACGAACCGACCGGCAACCTGGACCACCACACGGCCGACACGGTGTTCGATCT
CATGCGCGAGCTCAACCGCAAACAGGGCACGAGCCTCGTCGTCGTCACCCACGACGTCGAGCTCGCCGCGCGCATGGATC
GACAGTTGCGCCTCGTCGACGGGACATTGCAGGCGGCGTAA

Protein sequence : 
MNETVLRCSGLGKTFRQGKVDVPVLRSVDLAVGTAESLAIVGASGSGKSTLLHLLGGLDTPTRGDVALLGKNPFALSEAE
RCRLRNTALGFVYQFHHLLPEFSAVENAAMPLIIRRVARAEALARAAEVLDAVGLTHRLAHRPGELSGGERQRVAIARAV
VTRPACILADEPTGNLDHHTADTVFDLMRELNRKQGTSLVVVTHDVELAARMDRQLRLVDGTLQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_1760 YP_315518.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-34 49
Tbd_1760 YP_315518.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 7e-36 44