Gene Information

Name : Tbd_1583 (Tbd_1583)
Accession : YP_315341.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1668012 - 1668737 bp
Length : 726 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCGCCGCTCCCCCCTCCGCCAACGCTGTCTTCGTCGCCCGCGGGCTGACCAAGGTCTATCACATGGGCGAGGTCGA
GGTGCAGGCGCTGCGCGGCATCGATCTCACGCTGGAGCGCGGCGAACTCGTCGTGCTGCTGGGCCCGTCGGGCAGCGGCA
AGTCGACGCTCCTCAACATTCTCGGCGGGCTCGACGTGCCGAGCGGCGGCGAGGTCTATTACCTCGACCACAAGCTGACC
GGTGCGTCCGAAGCCGACCTCACGCGATTTCGCCGCGAGCATGTCGGCTTCGTCTTCCAGTTCTACAACCTGATTCCGAG
CCTGACGGCGCGCGAGAACGTCGCCGCGGTGACCGAGATCTCGCCGTCGCCGATGCGCCCCGAAGACGCGCTCGCGCTCG
TCGGGCTCGGCAACCGGCTCGACCACTTTCCGGCGCAGCTCTCGGGTGGCGAACAGCAACGCGTCGCGATCGCGCGCGCC
ATCGCGAAGAATCCGGCCGTTCTGCTGTGCGACGAGCCGACCGGCGCGCTCGACTCGGCAACCGGTGTCGTCGTGCTCGA
AGTGCTCGAAAAGGTGAACCGCGAACTTGGCACGCTGACCGTGCTCATCACCCACAACGCCGGCATCGCCGACATGGCCG
ACCGCGTGATCCGGCTCTCCGACGGCCACATTGTCGACATCCGCAGCAACGCCGTGAAGAAGGCGGCGCGCGAGCTTTCC
TGGTAG

Protein sequence : 
MSAAPPSANAVFVARGLTKVYHMGEVEVQALRGIDLTLERGELVVLLGPSGSGKSTLLNILGGLDVPSGGEVYYLDHKLT
GASEADLTRFRREHVGFVFQFYNLIPSLTARENVAAVTEISPSPMRPEDALALVGLGNRLDHFPAQLSGGEQQRVAIARA
IAKNPAVLLCDEPTGALDSATGVVVLEVLEKVNRELGTLTVLITHNAGIADMADRVIRLSDGHIVDIRSNAVKKAARELS
W

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_1583 YP_315341.1 ABC transporter ATPase NC_012469.1.7685735. Protein 7e-53 51
Tbd_1583 YP_315341.1 ABC transporter ATPase NC_008702.1.4606598. Protein 7e-32 46
Tbd_1583 YP_315341.1 ABC transporter ATPase NC_012469.1.7686878. Protein 4e-38 44
Tbd_1583 YP_315341.1 ABC transporter ATPase CP001581.1.gene598.p Protein 4e-39 42
Tbd_1583 YP_315341.1 ABC transporter ATPase CP001581.1.gene798.p Protein 6e-39 41