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Name : Tbd_1434 (Tbd_1434) Accession : YP_315192.1 Strain : Thiobacillus denitrificans ATCC 25259 Genome accession: NC_007404 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1522373 - 1524049 bp Length : 1677 bp Strand : + Note : - DNA sequence : ATGAACGCGCCGCAAACGCCGCTCAGCGCCGACGTGCTCGCCGGCTTGCGTCGCGAGGCGCAGGCGGCCGGCCAGAGCAT CGTGCTGCGCGTGCAGGAGCAGTTCGGCCTCGACGCCGACACGGCCTTGCGCATGGTCGCCGCGCAGACCCGGTTGCCGG CCTTCGACATGGCGGCACTGAATGCGCTCACCCCCGACTTCAACCGCCTGGGCTTCAGCGAGGCCGCACGGCGGCATTGC GTCGCGGCACGCGACGGGACGTCGAAGCTCTGGCTGCTGCTGACCGATCCCTGGGACAGCGCGGCCTCGGCGTACGCCGC GCACGTGCTCGGCGAGCCTTTCCGGACCGGCCTTGCGCACCCCGCCGATCTCGCCGCGCTGCTCGCTCGCCACGAAGACG GCCTGCGCGCGATGGAGGGCGTGGGCGGCGGCAAAGTCCAGAACGCCGCCGACCCCGGCATCGAGTCGCTGTCTTTCGCC AGCATCGCCGAGGACGCGAGCCCGGTCGTGCGGCTCGTGCGCTCGACGCTCTACGACGCGCTCAAGGCCGGCGCGTCGGA CATCCACCTCGAGACCGACGCGCGCGGGCTCACGGTCAAATACCGCATCGACGGCGTACTCTCGCACGTCGCGCAGATCG CCGGAACAGACGTCGCCGAGCAGGCGGTCTCGCGGATCAAGGTCATGTCCGAGCTCGACATCGCCGAGCGCCGCGTGCCG CAGGACGGCCGTTTCAAGGTCGCGATGCAAGGCCGCGAAGTCGACGTCCGCGTGTCGGTGATGCCGAGCGTGTTCGGCGA GGACGCGGTACTGCGCATCCTCGACCGTCAGGCGCTGTCCGAGGAACTGGCGGGCTTGACCCTCGAAGGCCTCGGCTACG CCGGGACCTCGCTCGCCCGAATTCGCAAGCTCGCGGCCGAGCCCTACGGCATGCTGCTCGTCACCGGCCCGACGGGATCC GGAAAGACGACGACCCTGTATGCCGCGATTTCGGAGATCAACCACGGCCGCGACAAGATCGTCACGATCGAGGACCCCGT CGAATACCAGCTCCCGGGCGTCCTGCAGATTCCGGTCAACGAGAAAAAGGGGCTCAGCTTCGCGCGCGGCCTGCGCTCGA TCCTGCGCCACGATCCCGACAAGATCATGGTCGGTGAAATCCGCGACGCCGACACGGCCCAGATCGCCGTCCAGTCGGCG CTTACCGGGCACCTCGTGTTCACGACCGTGCACGCGAACAACGTCTTCGACGTCATCGGCCGTTTCATCCACATGGGGGT CGACCCCTACAGCTTCGTCTCGGCGCTCAACGGCATCGTCGCGCAACGGCTCGTGCGCATGACTTGCCAGCACTGCGCGC AAGCCGCGACGCCGAACGCGGAACTGCTCGAGCTGTCCGGGCTCAGTGTCGACGACACGCGCGACTACAACTTCCGCCAG GGCGCGGGCTGCGGCCATTGCCGCGGCAGCGGCTACAAGGGCCGCCGAGCGGTCGCCGAGATCCTGCTCCTCACCGACAC CCTGCGCGAACTCGTCGTCGCCCGCGCCCCGATCGGCCAGATCAAGGAAGCCGCGACACGCGGCGGCACGCGCAACCTGC GCGACGAAGCCCTCGCGCTGGTGAAGGCCGGCGACACCACCCTCGAAGAGATCAACCGTGTCACGCTGGTCGGCTGA Protein sequence : MNAPQTPLSADVLAGLRREAQAAGQSIVLRVQEQFGLDADTALRMVAAQTRLPAFDMAALNALTPDFNRLGFSEAARRHC VAARDGTSKLWLLLTDPWDSAASAYAAHVLGEPFRTGLAHPADLAALLARHEDGLRAMEGVGGGKVQNAADPGIESLSFA SIAEDASPVVRLVRSTLYDALKAGASDIHLETDARGLTVKYRIDGVLSHVAQIAGTDVAEQAVSRIKVMSELDIAERRVP QDGRFKVAMQGREVDVRVSVMPSVFGEDAVLRILDRQALSEELAGLTLEGLGYAGTSLARIRKLAAEPYGMLLVTGPTGS GKTTTLYAAISEINHGRDKIVTIEDPVEYQLPGVLQIPVNEKKGLSFARGLRSILRHDPDKIMVGEIRDADTAQIAVQSA LTGHLVFTTVHANNVFDVIGRFIHMGVDPYSFVSALNGIVAQRLVRMTCQHCAQAATPNAELLELSGLSVDDTRDYNFRQ GAGCGHCRGSGYKGRRAVAEILLLTDTLRELVVARAPIGQIKEAATRGGTRNLRDEALALVKAGDTTLEEINRVTLVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-79 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-79 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tbd_1434 | YP_315192.1 | type II secretion system protein E | VFG1876 | Protein | 2e-77 | 47 |
| Tbd_1434 | YP_315192.1 | type II secretion system protein E | VFG2048 | Protein | 1e-80 | 46 |
| Tbd_1434 | YP_315192.1 | type II secretion system protein E | VFG0182 | Protein | 2e-76 | 46 |
| Tbd_1434 | YP_315192.1 | type II secretion system protein E | VFG0233 | Protein | 9e-72 | 43 |
| Tbd_1434 | YP_315192.1 | type II secretion system protein E | VFG2426 | Protein | 1e-63 | 42 |
| Tbd_1434 | YP_315192.1 | type II secretion system protein E | VFG1880 | Protein | 1e-64 | 41 |
