Gene Information

Name : Tbd_1413 (Tbd_1413)
Accession : YP_315171.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1500258 - 1500959 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence :
ATGAACGACGCGCTGATCCGGCTTGCCGGCGTCACCAAGACCTACGGCCACGGGCCCGCCGCGTTCGAGGCGCTCAAGGG
AATCGATCTGACGATCGACGCCGGGGAGTTCGTCGCGATCATGGGCCCGAGCGGCTCGGGCAAGTCGACCGTGATGAACA
TCCTCGGCTGCCTCGATACGCCGACCGCGGGCAGCTACCTCTTCGAGGGCGTGCACGTCGAGCGTATGACGCGCAACCAG
CGCGCGCTCTTGCGCCGCAACTACCTCGGCTTCGTCTTCCAGGGCTTCAATCTGCTCGCGCGCACGACCGCGCTCGAGAA
TGTCGAACTGCCGCTGATCTACCGCGGCGAGCCCGCCGCCCGGCGCCACGCCGCAGCCCGCGCCGCGCTTGCCCAGGTCG
GCCTCGAGGGCTGGGAGCACCATACGCCGGCCGAACTGTCGGGCGGCCAGCAGCAGCGTGTGGCGATCGCGCGCGCGATC
GTCACCGCGCCCGAGGTGTTGCTCGCCGACGAACCCACCGGCAACCTCGACACGCAGACGAGCAAGGAAATCATGGACCT
GATCAGCGCGCTCAATCGCGACCAGGCGATCACGGTATTGATGGTGACGCACGAGCCGGAGATGGCAGCGTACGCGCGCC
GCGCGATCCGTTTCGTCGACGGCCGTGTGGCCAGCGACGGCAGCGGGCACGGGGACGCCTGA

Protein sequence :
MNDALIRLAGVTKTYGHGPAAFEALKGIDLTIDAGEFVAIMGPSGSGKSTVMNILGCLDTPTAGSYLFEGVHVERMTRNQ
RALLRRNYLGFVFQGFNLLARTTALENVELPLIYRGEPAARRHAAARAALAQVGLEGWEHHTPAELSGGQQQRVAIARAI
VTAPEVLLADEPTGNLDTQTSKEIMDLISALNRDQAITVLMVTHEPEMAAYARRAIRFVDGRVASDGSGHGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_1413 YP_315171.1 ABC transporter ATPase NC_012469.1.7686878. Protein 4e-51 52
Tbd_1413 YP_315171.1 ABC transporter ATPase NC_008702.1.4606598. Protein 5e-41 50
Tbd_1413 YP_315171.1 ABC transporter ATPase CP001581.1.gene798.p Protein 9e-35 43
Tbd_1413 YP_315171.1 ABC transporter ATPase NC_012469.1.7685735. Protein 2e-32 42
Tbd_1413 YP_315171.1 ABC transporter ATPase CP001581.1.gene598.p Protein 2e-37 41