Gene Information

Name : Tbd_0136 (Tbd_0136)
Accession : YP_313894.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 145612 - 146274 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCATACTCCTGGTCGAAGACGACGCCCTGTTGGGCGACGGCCTCAAGGCCGGGCTCTCGCAATCGGGCTTTGCCGT
CGACTGGCTGCGCGACGGCGAGGCGGCGGTCACCGCGCTCACCACCGAGCGCTTCGCCGCGGTCGTGCTCGATCTGGGCC
TGCCGCGGCGCGACGGTCTGTCGGTTCTGCAATGGCTGCGTGGGCGCGGCGACCCGACGCCGGTGCTGGTCCTCACCGCG
CGCGACCAGCTCGAAGACAAGGTGCGCGGCCTCGATCTCGGTGCCGACGATTACGTGCTGAAGCCCTTCGACCTCGACGA
GGTCGCGGCGCGCCTGCGTGCGCTGATGCGGCGTGCGCACGGCAAATCCGCCCCGCTTCTCAAGCTCGGCGACATCGAAC
TCGATCCGGCCGCGCGCTCGGTCACGCAGCGCGGACAGCCGGTCGACCTGACCGGCCGCGAGTTCGATCTGCTGCACGTC
CTGCTGCAGAGCAGCGGCCACGTGCTGACCCGGCGCATGCTCGAAGAACAGCTCTATACCTGGGACGAAGGCGTCGGCAG
CAACGCGCTCGAGGTTCATGTCCATCACCTGCGACGCAAGCTCGGCAACGACGTGATCCGCACCGTCCGCGGCGTCGGCT
ACATGGCGGCGCCCCCGACGTGA

Protein sequence : 
MRILLVEDDALLGDGLKAGLSQSGFAVDWLRDGEAAVTALTTERFAAVVLDLGLPRRDGLSVLQWLRGRGDPTPVLVLTA
RDQLEDKVRGLDLGADDYVLKPFDLDEVAARLRALMRRAHGKSAPLLKLGDIELDPAARSVTQRGQPVDLTGREFDLLHV
LLQSSGHVLTRRMLEEQLYTWDEGVGSNALEVHVHHLRRKLGNDVIRTVRGVGYMAAPPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-31 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_0136 YP_313894.1 two component transcriptional regulator BAC0487 Protein 6e-35 45
Tbd_0136 YP_313894.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-22 43
Tbd_0136 YP_313894.1 two component transcriptional regulator BAC0197 Protein 1e-32 43
Tbd_0136 YP_313894.1 two component transcriptional regulator AE000516.2.gene3505. Protein 2e-23 42
Tbd_0136 YP_313894.1 two component transcriptional regulator CP000647.1.gene1136. Protein 3e-21 42
Tbd_0136 YP_313894.1 two component transcriptional regulator BAC0530 Protein 3e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_0136 YP_313894.1 two component transcriptional regulator VFG1390 Protein 2e-28 45
Tbd_0136 YP_313894.1 two component transcriptional regulator VFG0473 Protein 3e-34 45
Tbd_0136 YP_313894.1 two component transcriptional regulator VFG1386 Protein 2e-24 41
Tbd_0136 YP_313894.1 two component transcriptional regulator VFG1389 Protein 4e-23 41