Gene Information

Name : Tbd_1338 (Tbd_1338)
Accession : YP_315096.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1421275 - 1421682 bp
Length : 408 bp
Strand : -
Note : -

DNA sequence :
ATGGAGAGCAATCTAGGGAATCTGAGCATCGGCGCCTTCGCCAAGGCCGTCGGGGTCAATGTGGAAACAATAAGGTTCTA
TCAGCGAAGGGGCCTGTTGCCGGAGCCGGACAAGCCCTATGGCAGCATTCGCCGCTATACGACGTCCGATGTGTCGCGGA
TGCAGTTCATCAAGGCCGCGCAGCGCCTGGGCTTCAGTCTGGACGAGATCGCCGAGCTGCTCGAACTCGAGGACGGTTCG
CATTGCAGCGAAGCGCGCGCGCAGGCCGAACGCAAGCTCGTGGACGTGCGCGCCCGTCTCGCCGACCTGCGGCGTATCGA
ACGCGTACTGGCCGACCTGATCCAGCGCTGCTGCGCTATTAGCGGAGATGTTCGGTGTCCGCTCATTGCATCGCTGAAAG
GGAGCTGA

Protein sequence :
MESNLGNLSIGAFAKAVGVNVETIRFYQRRGLLPEPDKPYGSIRRYTTSDVSRMQFIKAAQRLGFSLDEIAELLELEDGS
HCSEARAQAERKLVDVRARLADLRRIERVLADLIQRCCAISGDVRCPLIASLKGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 2e-39 69
merR AET25401.1 MerR Not tested PAGI-2(C) Protein 3e-36 69
merR AFG30124.1 MerR Not tested PAGI-2 Protein 3e-36 69
merR YP_006098391.1 mercuric resistance operon transcriptional regulator Not tested Tn2411 Protein 5e-36 69
merR AGK07025.1 MerR Not tested SGI1 Protein 2e-35 69
merR AGK07083.1 MerR Not tested SGI1 Protein 2e-35 69
merR ACK44535.1 MerR Not tested SGI1 Protein 3e-36 69
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 8e-36 69
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 5e-36 69
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 7e-33 63
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 2e-20 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_1338 YP_315096.1 MerR family transcriptional regulator BAC0688 Protein 2e-37 71
Tbd_1338 YP_315096.1 MerR family transcriptional regulator BAC0687 Protein 1e-36 70
Tbd_1338 YP_315096.1 MerR family transcriptional regulator BAC0683 Protein 1e-37 70
Tbd_1338 YP_315096.1 MerR family transcriptional regulator BAC0684 Protein 4e-38 70
Tbd_1338 YP_315096.1 MerR family transcriptional regulator BAC0232 Protein 1e-36 70
Tbd_1338 YP_315096.1 MerR family transcriptional regulator BAC0689 Protein 3e-36 70
Tbd_1338 YP_315096.1 MerR family transcriptional regulator BAC0686 Protein 6e-38 69