Gene Information

Name : Tbd_1293 (Tbd_1293)
Accession : YP_315051.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Virulence
Product : tyep II secretion system protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1365200 - 1365739 bp
Length : 540 bp
Strand : +
Note : -

DNA sequence : 
GTGGGCGGCGCGGCAGTCCCCCGTCGCAGTAAATGTTGCGGGCGTCGATCGACGTCGACCGGCGCCCGCAGCCAACGGTT
GTTTTGCAAGCGAGAGATGCCCATGCAGTGCAACAAACCCAATTCCCGTTTCCTTGGCAAAAGCCGGGGATTCACGCTCC
TCGAACTCCTCGTCGTGCTGGTCATCATCGGCCTGCTCGCGGGGTACGTGGGGCCCAAGTATTTCGCCCAGATCGGCAAG
TCCGAGGTGAAGACCGCGCGCGCTCAGATCGACGCGCTGGAAAAGGCGCTCGACCAGTACCGCCTCGACGTCGGCCGCTA
CCCGGCGACCGAACAGGGCCTGGCCGCGCTGACCGAGCGGCCGCAGGACGAAGCCAAATGGGCCGGACCCTACCTCAAGA
AGGCCGCGCCGCTCGACCCCTGGGGCAAGCCCTACGTCTACCAGCAGCCCGGCACCCACGGTGAGTACGACCTGTCTTCC
TACGGTACCGACGGCCAGCCTGGCGGCACCGGCGAATCCGCCGACATCACGAACTGGTAA

Protein sequence : 
MGGAAVPRRSKCCGRRSTSTGARSQRLFCKREMPMQCNKPNSRFLGKSRGFTLLELLVVLVIIGLLAGYVGPKYFAQIGK
SEVKTARAQIDALEKALDQYRLDVGRYPATEQGLAALTERPQDEAKWAGPYLKKAAPLDPWGKPYVYQQPGTHGEYDLSS
YGTDGQPGGTGESADITNW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 7e-19 50
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-19 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_1293 YP_315051.1 tyep II secretion system protein G VFG2050 Protein 2e-19 50
Tbd_1293 YP_315051.1 tyep II secretion system protein G VFG0180 Protein 6e-19 48
Tbd_1293 YP_315051.1 tyep II secretion system protein G VFG1871 Protein 1e-20 45