Gene Information

Name : SSON_P027 (SSON_P027)
Accession : YP_313282.1
Strain :
Genome accession: NC_007385
Putative virulence/resistance : Unknown
Product : IS100 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 21831 - 22835 bp
Length : 1005 bp
Strand : +
Note : -

DNA sequence :
ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACT
GGGGCTCTCCCGCAATACCGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG
CTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA
ATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCC
TCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATG
GTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCCCGGATACAGCCGAATGTTGTACATCGAATTCACTGACAATATGCGT
TATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATAT
GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG
AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACC
CGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGAGCACTGTCGATGTTGAAACAGCCAACCGCCA
CGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGTGATCGCTGGCTCG
AAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCCTGGTGAAAATCTGGTGAGCTTC
GACAACCCCGTTACTTTATTCGTACCCCTTATAATGGGGTGTTAG

Protein sequence :
MVTFETVMEIKILHKQGMSSRAIARELGLSRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV
IAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNMR
YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT
RNSFYIPLMTRLRPMGSTVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVSF
DNPVTLFVPLIMGC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 2e-152 99
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 2e-152 99
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 2e-152 99
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-152 99
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 4e-152 99
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 4e-151 98
y2411 NP_669718.1 transposase Not tested HPI Protein 4e-151 98
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 4e-151 98
unnamed CAA21403.1 - Not tested HPI Protein 4e-151 98
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 3e-151 98
api83 CAF28557.1 transposase Not tested YAPI Protein 3e-151 98
unnamed AAG37051.1 unknown Not tested espC PAI Protein 4e-151 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON_P027 YP_313282.1 IS100 ORF1 VFG1626 Protein 1e-152 99
SSON_P027 YP_313282.1 IS100 ORF1 VFG1607 Protein 1e-152 99
SSON_P027 YP_313282.1 IS100 ORF1 VFG1461 Protein 2e-152 99
SSON_P027 YP_313282.1 IS100 ORF1 VFG1514 Protein 1e-152 99
SSON_P027 YP_313282.1 IS100 ORF1 VFG0780 Protein 2e-151 95