Gene Information

Name : SSON_P026 (SSON_P026)
Accession : YP_313281.1
Strain :
Genome accession: NC_007385
Putative virulence/resistance : Unknown
Product : IS3 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 20174 - 21043 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAGGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAG
CGGCTGGTATACGTGGTGTCAGCGGCGGACAGGGATAAGCCCTCGTCAGCAGTTCCGTCAGCACTGCGACAGCGTTGTCC
TCGCGGCGGCCTTTACCCGGTCAAAACAGCGTTACGGTGCACCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCAC
TTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGGCTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAG
TTACCGCGCACATGGCCTGCCTGTGTCAGAAAATCTGCTGGAGCAGGATTTTTACGCCAGTGGTCCGAACCAGAAGTGGG
CGGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCTGTGGTCATTGACCTGTGGTCACGTGCCGTT
ATTGGCTGGTCCATGTCACCACGCCTGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAG
ACCCCGGAACGTTATCGTTCACTCGGACCGAGGAAGTCAGTACTGTTCAGCAGATTATCAGGCGCTGCTGAAGTGGCATA
ATCTGCGTGGCAGTATGAGCGCAAAGGGCTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTG
GAATGTCTCCACGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACAGTGTTTAATTATATCGAATGTGATTACAA
TCGCTGGCGACGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAG

Protein sequence :
MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTGISPRQQFRQHCDSVVLAAAFTRSKQRYGAPRLTDELRAQGYH
FNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAV
IGWSMSPRLTAQLACDALQMALWRRKRPRNVIVHSDRGSQYCSADYQALLKWHNLRGSMSAKGCCYDNACVESFFHSLKV
ECLHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENQNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-128 97
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 9e-129 97
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-127 96
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 5e-111 85
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 8e-44 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-44 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-44 44
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 4e-44 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-44 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 5e-44 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 4e-44 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 6e-44 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 4e-44 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 4e-44 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 4e-44 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 4e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON_P026 YP_313281.1 IS3 ORF2 VFG1631 Protein 3e-111 85
SSON_P026 YP_313281.1 IS3 ORF2 VFG1706 Protein 2e-44 42