Gene Information

Name : SSON_P025 (SSON_P025)
Accession : YP_313280.1
Strain :
Genome accession: NC_007385
Putative virulence/resistance : Unknown
Product : IS3 ORF1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 19878 - 20177 bp
Length : 300 bp
Strand : +
Note : -

DNA sequence : 
ATGACAAAAACAGTATCAACCAGCAAAAAAACACGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGC
TGAACGCATCGGTGTTGCTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCTCAGCTCTATGCGTGGCGCAGCAAACTGC
AGCAACAGATGACCTCGTCTGAGCGTGAAAGTGAACTGGCCGCTGAAAATGCCCGCCTGAAGCGGCAACTGGCGGAGCAG
GCAGAGGAACTGGCTATCCTCCAAAAGGCCGCGACATACTTTGCGAAGCGCCTGAAATGA

Protein sequence : 
MTKTVSTSKKTRKQHSPEFRSEALKLAERIGVAAAARELSLYESQLYAWRSKLQQQMTSSERESELAAENARLKRQLAEQ
AEELAILQKAATYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 5e-27 94
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 5e-27 94
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 2e-26 94
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 2e-26 94
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 2e-28 87
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 2e-28 87
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 2e-28 87
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 3e-28 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON_P025 YP_313280.1 IS3 ORF1 VFG0603 Protein 1e-27 94
SSON_P025 YP_313280.1 IS3 ORF1 VFG1632 Protein 8e-27 94