Gene Information

Name : SSON_P119 (SSON_P119)
Accession : YP_313374.1
Strain :
Genome accession: NC_007385
Putative virulence/resistance : Unknown
Product : IS600 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 109478 - 110098 bp
Length : 621 bp
Strand : -
Note : -

DNA sequence :
GTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGCTGGCAGATAACGGAATTATCGTCGG
TCGTGACAGACTGGCACGTCTTCGTAAGGAGCTGAGGCTGCACTGTAAGCAGAAACGCAAGTTCAGGGCGACCACAAGCT
CTGACCACAATCTGCCGGTTACGCCGAATCTGCTGAATCAGAACTTTACGCCCACAGCACCTAATCAGGTCTGGGTCGCA
GATATAACGTATGTTGCCACCCGGGAAGGATGGCTGTATCTCGCTGGCGTCAAAGATGTTTATACGTGCGAAATTGTCGG
TTACGCCATGGGAGAACGCATGACGAAAGAGTTGACGGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCACCCACCTG
CCGGGCTAATCCACCACTCCGATCGAGGTTCACAGTACTGCGCATACGATTACCGGGTCATACAGGAGCAGTCTGGTCTG
AAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAATCTTCTGGGGAACGCTGAAAAATGAAAG
CCTGAGCCACTATCGTTTTAAGAGCCGGGATATTTCGTCAGCATACGGGAAAACTGATTGA

Protein sequence :
MAHIRTRETYGTRRLQTELADNGIIVGRDRLARLRKELRLHCKQKRKFRATTSSDHNLPVTPNLLNQNFTPTAPNQVWVA
DITYVATREGWLYLAGVKDVYTCEIVGYAMGERMTKELTGKALFMALRSQHPPAGLIHHSDRGSQYCAYDYRVIQEQSGL
KTSMSRKGNCYDNAPMEIFWGTLKNESLSHYRFKSRDISSAYGKTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 3e-87 93
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 3e-87 93
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 7e-87 92
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-86 92
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 9e-87 92
unnamed AAF09030.1 unknown Not tested SHI-O Protein 9e-87 92
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 9e-87 92
unnamed AAF09022.1 unknown Not tested SHI-O Protein 9e-87 92
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 5e-86 91
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-37 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-37 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-37 44
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 6e-20 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 6e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON_P119 YP_313374.1 IS600 ORF2 VFG1706 Protein 3e-87 92
SSON_P119 YP_313374.1 IS600 ORF2 VFG1484 Protein 3e-20 41