Gene Information

Name : mxiD (SSON_P107)
Accession : YP_313362.1
Strain :
Genome accession: NC_007385
Putative virulence/resistance : Virulence
Product : MxiD
Function : -
COG functional category : N : Cell motility
COG ID : COG1450
EC number : -
Position : 97171 - 98871 bp
Length : 1701 bp
Strand : +
Note : outermembrane protein of the secretin family; component of the Mxi-Spa secretion machinery

DNA sequence :
ATGAAAAAATTTAATATTAAATCTTTGACTCTCTTGATTGTATTGTTACCATTGATAGTTAATGCTAATAATATTGACTC
TCATTTATTAGAACAAAATGACATAGCGAAATATGTTGCTCAAAGTGATACGGTAGGATCTTTTTTTGAACGTTTTTCTG
CGTTATTAAATTATCCTATTGTTGTTAGCAAACAAGCTGCAAAAAAGAGAATATCTGGGGAGTTTGATTTATCTAATCCA
GAAGAAATGCTTGAAAAACTGACATTACTTGTGGGACTCATATGGTATAAAGATGGAAATGCATTATACATATATGACTC
TGGAGAATTAATAAGCAAAGTTATTTTGCTGGAGAATATATCACTTAATTATCTTATTCAGTATCTGAAGGATGCTAACC
TTTATGATCACAGATATCCTATAAGAGGAAATATTAGTGATAAAACATTCTATATATCTGGTCCTCCGGCATTGGTTGAA
CTGGTAGCTAATACAGCAACTTTGCTTGATAAGCAGGTTTCTTCTATTGGGACAGATAAAGTTAATTTTGGGGTTATAAA
ATTAAAAAATACATTTGTTAGTGACAGAACTTATAATATGAGAGGGGAGGATATTGTCATCCCAGGGGTGGCTACTGTTG
TAGAACGTTTATTAAATAATGGTAAGGCTCTGAGTAACAGACAAGCCCAAAATGATCCGATGCCACCCTTTAATATTACA
CAGAAAGTATCTGAGGATAGTAATGACTTTTCATTTAGTTCAGTTACCAATAGTTCTATATTAGAGGATGTATCACTTAT
TGCATATCCAGAAACCAATTCTATATTAGTCAAAGGTAATGATCAGCAAATACAGATTATTCGCGATATTATCACTCAGT
TAGATGTAGCCAAACGACATATAGAATTATCATTATGGATAATCGATATTGATAAATCTGAATTAAATAACCTTGGTGTT
AATTGGCAAGGAACGGCTTCATTTGGTGATTCGTTTGGTGCGTCATTTAATATGAGCTCATCAGCATCGATAAGCACTTT
GGACGGCAATAAGTTTATTGCTTCAGTTATGGCATTAAATCAGAAAAAGAAAGCAAATGTAGTTTCAAGGCCGGTGATTT
TGACACAAGAGAATATTCCGGCTATATTTGATAATAACAGGACTTTTTATGTGTCATTAGTTGGTGAGCGCAATTCTTCG
TTGGAGCATGTTACGTATGGAACATTGATAAATGTTATACCTCGCTTTTCATCTCGGGGACAAATTGAGATGTCTTTAAC
GATAGAGGATGGAACAGGAAATAGTCAGTCAAATTACAATTATAATAATGAAAATACATCTGTCCTTCCAGAAGTTGGAA
GGACCAAAATCAGTACAATAGCGAGAGTTCCACAAGGCAAAAGTTTGTTGATAGGTGGTTATACGCATGAAACGAACTCT
AACGAAATAGTATCTATTCCTTTTCTCTCCTCTATTCCTGTAATCGGTAATGTGTTCAAGTATAAAACAAGTAATATCAG
TAATATTGTAAGGGTTTTTCTGATTCAACCCCGTGAGATAAAGGAGTCAAGTTATTATAATACTGCAGAATATAAAAGCC
TCATATCTGAAAGAGAAATACAAAAGACTACACAAATAATCCCATCTGAAACTACTTTGCTGGAAGACGAAAAATCATTG
GTTTCATACTTAAATTACTAA

Protein sequence :
MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDTVGSFFERFSALLNYPIVVSKQAAKKRISGEFDLSNP
EEMLEKLTLLVGLIWYKDGNALYIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTFYISGPPALVE
LVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRGEDIVIPGVATVVERLLNNGKALSNRQAQNDPMPPFNIT
QKVSEDSNDFSFSSVTNSSILEDVSLIAYPETNSILVKGNDQQIQIIRDIITQLDVAKRHIELSLWIIDIDKSELNNLGV
NWQGTASFGDSFGASFNMSSSASISTLDGNKFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVSLVGERNSS
LEHVTYGTLINVIPRFSSRGQIEMSLTIEDGTGNSQSNYNYNNENTSVLPEVGRTKISTIARVPQGKSLLIGGYTHETNS
NEIVSIPFLSSIPVIGNVFKYKTSNISNIVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSETTLLEDEKSL
VSYLNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invG NP_457292.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 8e-119 50
invG NP_806501.1 virulence-associated secretory protein Virulence SPI-1 Protein 8e-119 50
invG NP_461819.1 outer membrane secretin precursor Virulence SPI-1 Protein 7e-120 50
invG YP_217817.1 invasion protein; outer membrane Virulence SPI-1 Protein 6e-120 50
ECs3733 NP_311760.1 EivG Not tested LIM Protein 6e-110 49
invG AAS66859.1 InvG Not tested SSR-2 Protein 2e-104 48
ysaC AAS66838.1 YsaC Not tested SSR-1 Protein 1e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mxiD YP_313362.1 MxiD VFG1004 Protein 0.0 99
mxiD YP_313362.1 MxiD VFG0559 Protein 3e-120 50