|
Name : ipaB (SSON_P090) Accession : YP_313345.1 Strain : Genome accession: NC_007385 Putative virulence/resistance : Virulence Product : IpaB Function : - COG functional category : S : Function unknown COG ID : COG2433 EC number : - Position : 84468 - 86210 bp Length : 1743 bp Strand : - Note : secreted by the Mxi-Spa secretion machinery; required for entry into epithelial cells DNA sequence : ATGCATAATGTAAGTACCACAACCACTGGTTTGTCTCTTGCCAAAATATTGGCTTCCACTGAGCTTGGAGACAATACTAT CCAGGCTGCAAATGATGCAGCTAACAAATTATTTTCTCTTACAATTGCTGATCTTACTGCTAACAAAAATATTAATACAA CTAATTCACACTCAACTTCAAATATATTAATCCCTGAACTTAAAGCACCAAAGTCATTAAATGCAAGTTCCCAACTAACG CTTTTAATTGGAAACCTTATTCAAATACTCGGTGAAAAATCTTTAACTGCATTAACAAATAAAATTACTGCTTGGAAGTC TCAGCAACAGGCAAGACAGCAAAAAAACCTAGAATTCTCCGATAAAATTAATACTCTTCTATCTGAAACTGAAGGACTAA CCAGAGACTATGAAAAACAAATTAATAAACTAAAAAACGCAGATTCTAAAATAAAAGACCTAGAAAATAAAATTAACCAA ATTCAAACAAGATTATCCGAACTCGACCCAGATTCACCAGAAAAGAAAAAATTAAGCCGGGAAGAAATACAACTCACTAT CAAAAAAGACGCAGCAGTTAAAGACAGGACATTGATTGAGCAGAAAACCCTGTCAATTCATAGCAAACTTACAGATAAAT CAATGCAACTCGAAAAAGAAATAGACTCTTTTTCTGCATTTTCAAACACAGCATCTGCTGAACAGCTATCAACCCAGCAG AAATCATTAACCGGACTTGCCAGTGTTACTCAATTGATGGCAACCTTTATTCAACTAGTTGGAAAAAATAATGAAGAATC TTTAAAAAATGATCTGGCTCTATTCCAGTCTCTCCAAGAATCAAGAAAAACTGAAATGGAGAGAAAATCTGATGAGTATG CTGCTGAAGTACGTAAAGCAGAAGAACTCAACAGAGTAATGGGTTGTGTTGGGAAAATACTTGGGGCACTTTTAACTATC GTTAGTGTTGTTGCAGCAGCTTTTTCTGGAGGAGCCTCTCTAGCACTGGCAGCTGTTGGTTTAGCTCTTATGGTTACGGA TGCTATAGTACAAGCAGCGACCGGCAATTCCTTCATGGAACAAGCCCTGAATCCGATCATGAAAGCAGTCATTGAACCCT TAATCAAACTCCTTTCAGATGCATTTACAAAAATGCTCGAAGGCTTGGGCGTCGACTCGAAAAAAGCCAAAATGATTGGC TCTATTCTGGGGGCAATCGCAGGCGCTCTTGTCCTGGTTGCAGCAGTAGTTCTCGTAGCCACTGTTGGTAAACAGGCAGC AGCAAAACTTGCAGAGAATATTGGCAAAATAATAGGTAAAACCCTCACAGACCTTATACCAAAGTTTCTCAAGAATTTTT CTTCTCAACTGGACGATTTAATCACTAATGCTGTTGCCAGATTAAATAAATTTCTTGGTGCAGCGGGTGATGAAGTAATA TCCAAACAAATTATTTCCACCCATTTAAACCAAGCAGTTTTATTAGGAGAAAGTGTTAACTCTGCCACACAAGCGGGAGG AAGTGTCGCTTCTGCTGTTTTCCAGAACAGCGCGTCTACAAATCTAGCAGACCTGACATTATCGAAATATCAAGTTGAAC AACTGTCAAAATATATCAGTGAAGCAATAGAAAAATTCGGCCAATTGCAGGAAGTAATTGCAGATCTATTAGCCTCAATG TCCAACTCTCAGGCTAATAGAACTGATGTTGCAAAAGCAATTTTGCAACAAACTACTGCTTGA Protein sequence : MHNVSTTTTGLSLAKILASTELGDNTIQAANDAANKLFSLTIADLTANKNINTTNSHSTSNILIPELKAPKSLNASSQLT LLIGNLIQILGEKSLTALTNKITAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQ IQTRLSELDPDSPEKKKLSREEIQLTIKKDAAVKDRTLIEQKTLSIHSKLTDKSMQLEKEIDSFSAFSNTASAEQLSTQQ KSLTGLASVTQLMATFIQLVGKNNEESLKNDLALFQSLQESRKTEMERKSDEYAAEVRKAEELNRVMGCVGKILGALLTI VSVVAAAFSGGASLALAAVGLALMVTDAIVQAATGNSFMEQALNPIMKAVIEPLIKLLSDAFTKMLEGLGVDSKKAKMIG SILGAIAGALVLVAAVVLVATVGKQAAAKLAENIGKIIGKTLTDLIPKFLKNFSSQLDDLITNAVARLNKFLGAAGDEVI SKQIISTHLNQAVLLGESVNSATQAGGSVASAVFQNSASTNLADLTLSKYQVEQLSKYISEAIEKFGQLQEVIADLLASM SNSQANRTDVAKAILQQTTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sipB | NP_457279.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-65 | 43 |
| sipB | NP_806488.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-65 | 43 |
| sipB | YP_217804.1 | cell invasion protein | Virulence | SPI-1 | Protein | 4e-66 | 43 |
| sipB | NP_461806.1 | translocation machinery component | Virulence | SPI-1 | Protein | 8e-65 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ipaB | YP_313345.1 | IpaB | VFG0987 | Protein | 0.0 | 99 |
| ipaB | YP_313345.1 | IpaB | VFG0546 | Protein | 3e-65 | 43 |
