|
Name : ybdM (SSON_0553) Accession : YP_309556.1 Strain : Shigella sonnei Ss046 Genome accession: NC_007384 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG1475 EC number : - Position : 594277 - 594906 bp Length : 630 bp Strand : - Note : Code: K; COG: COG1475 DNA sequence : ATGGGGGATACTATGCAACAACGATTAACGCAGGATTTAACGCAATTTCTCGCCAGCTTGCCGGAAGATGATCGCATCAA AGCGATTAATGAAATCCGCATGGCGATCCATCAGGTTAGCCCCTTTCGTGAAGAGCCAGTGGATTGCGTTCTGTGGGTTA AAAACAGCCAACTTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAAAAAACTGCTGCAAAAATCCATT GAAATAGATGGTTTTACCCAACCCATTGTGGTCACACATACGGATAAAAATGCCATGGAAATCGTGGATGGTTTTCACCG CCATGAAATTGGTAAAGGCTCATCATCATTAAAATTACGCTTAAAAGGTTATTTGCCGGTGACCTGTCTGGAAGGTACGC GTAATCAACGCATCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGCCATCAAATCACCGCCATGTCGGAAATCGTC CGTGAACTTAGCCAGTTGGGATGGGACGATAATAAAATTGGCAAAGAGCTGGGAATGGACAGCGACGAAGTGCTGCGCCT GAAGCAAATTAACGGCCTGCAAGAGCTGTTTGCCGACCGTCAATATTCCCGCGCCTGGACGGTTAAATAA Protein sequence : MGDTMQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSI EIDGFTQPIVVTHTDKNAMEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIV RELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4584 | NP_458668.1 | conserved hypothetical protein | Not tested | SPI-7 | Protein | 6e-55 | 58 |
| Z1644 | AAQ19140.1 | putative ParB-like nuclease | Not tested | PAI I CL3 | Protein | 2e-56 | 56 |
| ibrB | ADD91736.1 | predicted transcriptional regulator IbrB | Not tested | PAI-I AL862 | Protein | 2e-56 | 56 |
| Z1204 | NP_286739.1 | hypothetical protein | Not tested | TAI | Protein | 1e-56 | 56 |
| Z1644 | NP_287147.1 | hypothetical protein | Not tested | TAI | Protein | 1e-56 | 56 |
| z1204 | CAD33764.1 | Z1204 protein | Not tested | PAI I 536 | Protein | 2e-55 | 55 |
| t4278 | NP_807876.2 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-55 | 55 |
| APECO1_3503 | YP_854305.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 9e-43 | 53 |
| c5208 | NP_757056.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 9e-43 | 53 |
| ORF_30 | AAZ04440.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 6e-43 | 53 |
| ef0120 | AAM75321.1 | EF0120 | Not tested | Not named | Protein | 2e-31 | 53 |
| EF0607 | NP_814365.1 | ParB-like nuclease domain-containing protein | Not tested | Not named | Protein | 3e-31 | 53 |
| M5005_Spy_0164 | YP_281528.1 | parB-like nuclease | Not tested | Not named | Protein | 7e-30 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ybdM | YP_309556.1 | hypothetical protein | VFG1505 | Protein | 1e-55 | 55 |
