Name : basR (SSON_4288) Accession : YP_313017.1 Strain : Shigella sonnei Ss046 Genome accession: NC_007384 Putative virulence/resistance : Virulence Product : DNA-binding transcriptional regulator BasR Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 4551594 - 4552262 bp Length : 669 bp Strand : - Note : member of 2-component regulatory system; response regulator in two-component regulatory system with BasS DNA sequence : ATGAAAATTCTGATTGTTGAAGACGATACGCTGTTATTGCAGGGACTGATTCTGGCGGCGCAAACCGAAGGCTACACGTG CGATGGCGTAACAACCGCGCGGATGGCGGAACAAAGCCTTGAGGCCGGTCATTACAGCCTGGTGGTACTGGATTTAGGGT TACCCGACGAAGATGGACTGCATTTTCTCGCCCGTATCCGGCAGAAAAAATACACCCTGCCGGTACTGATCCTCACCGCT CGCGATACGCTGACCGACAAAATCGCCGGGCTGGATGTCGGTGCCGATGACTATCTGGTGAAGCCTTTTGCGCTGGAAGA GTTACACGCCCGTATCCGCGCCCTGCTACGACGCCATAATAATCAGGGCGAAAGTGAGCTGATTGTTGGCAATCTGACGC TGAATATGGGTCGCCGTCAGGTATGGATGGGCGGTGAAGAGTTGATTCTGACGCCCAAAGAATATGCTCTGCTGTCACGG TTAATGCTCAAAGCAGGCAGTCCGGTACATCGGGAAATTCTCTACAACGACATCTATAACTGGGACAATGAACCCTCGAC CAACACCCTGGAAGTGCATATCCACAATCTGCGCGACAAAGTGGGCAAAGCCCGTATCCGCACCGTGCGCGGCTTTGGCT ATATGCTGGTCGCGAATGAGGAAAACTAA Protein sequence : MKILIVEDDTLLLQGLILAAQTEGYTCDGVTTARMAEQSLEAGHYSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTA RDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSR LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVANEEN |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 4e-29 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
basR | YP_313017.1 | DNA-binding transcriptional regulator BasR | BAC0487 | Protein | 1e-54 | 60 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
basR | YP_313017.1 | DNA-binding transcriptional regulator BasR | VFG0473 | Protein | 7e-86 | 91 |