Name : nrfC (SSON_4253) Accession : YP_312984.1 Strain : Shigella sonnei Ss046 Genome accession: NC_007384 Putative virulence/resistance : Virulence Product : formate-dependent nitrite reductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0437 EC number : - Position : 4515803 - 4516474 bp Length : 672 bp Strand : + Note : Fe-S centers; Code: C; COG: COG0437 DNA sequence : ATGACCTGGTCTCGTCGCCAGTTTCTCACCGGCGTCGGCGTGCTGGCAGCCGTCAGCGGCACCGCAGGGCGCGTGGTGGC GAAAACGTTGAATATCAATGGGGTGCGTTACGGCATGGTGCATGACGAGTCGTTATGCATCGGCTGTACCGCCTGTATGG ATGCTTGTCGGGAAGTGAACAAGGTGCCGGAAGGCGTCTCGCGCCTGACGATTATTCGTAGCGAGCCGCAGGGCGAATTT CCTGATGTGAAATATCGCTTCTTCCGTAAGTCTTGCCAGCACTGCGATCATGCGCCGTGCGTTGACGTCTGCCCGACCGG TGCGTCTTTTCGTGATGCCGCTAGCGGGATTGTCGATGTTAATCCTGATCTCTGCGTCGGTTGTCAGTACTGCATCGCCG CCTGTCCGTACCGCGTGCGCTTTATCCATCCGGTCACGAAGACGGCGGACAAATGCGATTTCTGCCGTAAAACCAATTTG CAGGCCGGTAAGCTGCCCGCGTGTGTTGAGGCTTGCCCGACGAAGGCGCTGACGTTTGGCAATCTGGACGATCCTAACAG TGAGATTTCGCAACTGCTGCGCCAGAAGCCTACTTACCGCTACAAGCTGGCGCTGGGAACCAAACCGAAGCTGTACCGCG TACCGTTTAAATACGGGGAGGTGAGCCAATGA Protein sequence : MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEF PDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ttrB | YP_216393.1 | tetrathionate reductase complex subunit B | Virulence | SPI-2 | Protein | 2e-31 | 41 |
ttrB | NP_805056.2 | tetrathionate reductase subunit B | Virulence | SPI-2 | Protein | 2e-31 | 41 |
ttrB | NP_456142.1 | tetrathionate reductase subunit B | Virulence | SPI-2 | Protein | 3e-31 | 41 |
ttrB | NP_460350.1 | tetrathionate reductase complex subunit B | Virulence | SPI-2 | Protein | 3e-31 | 41 |
ttrB | CAB37414.1 | tetrathionate reductase subunit B (TtrB) | Virulence | SPI-2 | Protein | 2e-31 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
nrfC | YP_312984.1 | formate-dependent nitrite reductase | VFG0486 | Protein | 1e-31 | 41 |