Gene Information

Name : SSON_3609 (SSON_3609)
Accession : YP_312394.1
Strain : Shigella sonnei Ss046
Genome accession: NC_007384
Putative virulence/resistance : Unknown
Product : IS150 ORF B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3779250 - 3780143 bp
Length : 894 bp
Strand : -
Note : Code: L; COG: COG2801

DNA sequence :
GTGAGTCATATTCGCCCTGACTTTCCAGAACCATACGGACTGCCCGTTGACGGACTTCGGGGGAAAACGAGTATTTTTAG
TCATCCTGTTTACCTCTTTCTCAGGGAGTTTAGTCTCCAGGATTCCCGGGGCGGTTCATTATCTAAAAAAGCTGAAAGCC
TTAGCTCAGGAAAAATTACGATTGGAACAAAAGAAAAAGTAATCATTATTAATGAGTTAAGGCAATGTCATCCATTATCA
CAATTACTGGTTATCGCGGATTTGCCACGTAGTACATTTTACTATCACGTGAAACGCCTTAATGCGCCAGATCCATATCA
ACTTGTTAAACAAGTAATATTGAGAATATACCATCAGCATAAAGGGCGTTATGGTTATCGACGCATCAGACTTGCCTGCC
GTAACGAGAGCATTTTACTTAATGGTAAAACCATCAGAAAGTTAATGAAGGAACTGGGTATCAGCTCACTTATCAGGCGC
AAGAAGTACCGTACCTATCGTGGAGAACAGGGGCGAACTTGTAATAATTTACTGAAGAGACAATTTTATGCTGACCGCCC
AAATCAAAAGTGGGTAACAGATGTCACAGAGTTTAAGGTCGATGGCAGGAAGCTCTATTTATCACCAATCATGGACCTGT
ATAATGGAGAAATAGTCTCATATAACCTTACTGAGCGCCCATTAGCATCAATGGTAAAGAGCATGCTATTAGATGCGGTA
GAACAACTCAATAAAGACGATAAGCCCTTGTTGCATAGTGATCAGGGGTGGCAATATCAGATGCCTCGTTGGCAACGTTG
GTTGAGTGATAATGGCATAACACAAAGCATGTCCCGACGTGGTAACTGCTTAGATAATGCAGCAATGGAAAGCTTTTTTA
GTACTTTAAAATAA

Protein sequence :
MSHIRPDFPEPYGLPVDGLRGKTSIFSHPVYLFLREFSLQDSRGGSLSKKAESLSSGKITIGTKEKVIIINELRQCHPLS
QLLVIADLPRSTFYYHVKRLNAPDPYQLVKQVILRIYHQHKGRYGYRRIRLACRNESILLNGKTIRKLMKELGISSLIRR
KKYRTYRGEQGRTCNNLLKRQFYADRPNQKWVTDVTEFKVDGRKLYLSPIMDLYNGEIVSYNLTERPLASMVKSMLLDAV
EQLNKDDKPLLHSDQGWQYQMPRWQRWLSDNGITQSMSRRGNCLDNAAMESFFSTLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 5e-64 57
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 2e-55 51
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 2e-43 48
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 2e-43 48
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 1e-45 45
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 8e-45 45