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Name : SSON_3249 (SSON_3249) Accession : YP_312061.1 Strain : Shigella sonnei Ss046 Genome accession: NC_007384 Putative virulence/resistance : Unknown Product : IS630 orf Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3335 EC number : - Position : 3428116 - 3429147 bp Length : 1032 bp Strand : - Note : Code: L; COG: COG3335 DNA sequence : ATGCCGATCATAGCACCAATTTCCCGTGACGAACGACGCCTGATGCAGAAAGCCATCCATAAAACACACGATAAAAATTA TGCCCGCAGACTGACTGCCATGCTGATGCTGCACCGGGGCGACCGTGTCAGCGACGTTGCCAGAACGCTCTGCTGCGCCC GTTCCTCTGTTGGACGCTGGATTAACTGGTTCACGCAGTCGGGTGTTGAGGGACTGAAATCATTACCTGCCGGGCGTGCC CGTCGCTGGCCGTTTGAGCATATCTGCACACTGTTACGTGAGCTGGTAAAACATTCTCCCGGCGACTTTGGCTACCAGCG TTCACGCTGGAGTACAGAACTGCTGGCAATAAAAATCAATGAGATAACCGGTTGCCAGTTAAATGCCGGAACCGTTCGCC GCTGGTTGCCGTCTGCGGGGATTGTGTGGCGAAGGGCTGCGCCAACTCTGCGTATCCGTGACCCGCATAAAGATGAAAAG ATGGCAGCAATCCATAAAGCACTGGACGAATGCAGCGCAGAGCATCCGGTCTTTTATGAAGATGAAGTGGATATCCATCT TAATCCCAAAATCGGTGCGGACTGGCAACTGCGCGGACAGCAAAAACGGGTGGTCACGCCGGGACAGAATGAAAAATATT ATCTGGCCGGAGCGCTGCACAGCGGGACAGGTAAAGTCAGCTGTGTGGGCGGCAACAGCAAAAGTTCGGCGCTGTTCATC AGCCTGCTGAAGCGGCTTAAAGCGACATACCGTCGGGCGAAAACCATCACGCTGATCGTGGACAACTACATTATCCACAA AAGCCGGGAAACACAGAGCTGGCTGAAGGAGAACCCGAAGTTCAGGGTCATTTATCAGCCGGTTTACTCGCCATGGGTGA ATCATGTTGAACGGCTATGGCAGGCACTTCACGACACAATAACGCGTAATCATCAGTGCAGCTCAATGTGGCAACTGTTG AAAAAAGTTCGCCATTTTATGGAAACCGTCAGCCCATTCCCCGGAGGCAAACATGGGCTGGCAAAAGTGTAG Protein sequence : MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVSDVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRA RRWPFEHICTLLRELVKHSPGDFGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSAGIVWRRAAPTLRIRDPHKDEK MAAIHKALDECSAEHPVFYEDEVDIHLNPKIGADWQLRGQQKRVVTPGQNEKYYLAGALHSGTGKVSCVGGNSKSSALFI SLLKRLKATYRRAKTITLIVDNYIIHKSRETQSWLKENPKFRVIYQPVYSPWVNHVERLWQALHDTITRNHQCSSMWQLL KKVRHFMETVSPFPGGKHGLAKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70294.1 | TnpA-like protein | Not tested | HPI | Protein | 5e-156 | 94 |
| Z4330 | NP_289555.1 | transposase | Not tested | OI-122 | Protein | 7e-117 | 89 |
| unnamed | AAL57563.1 | putative transposase | Not tested | LEE | Protein | 5e-117 | 89 |
| st46 | CAC81884.1 | ST46 protein | Not tested | LEE II | Protein | 5e-117 | 89 |
| IS630-like | CAI43817.1 | putative transposase | Not tested | LEE | Protein | 5e-117 | 89 |
| tnpA | AFL65914.1 | transposase | Not tested | SGI1-J6 | Protein | 1e-105 | 65 |
| api42 | CAF28516.1 | DNA binding protein | Not tested | YAPI | Protein | 2e-93 | 62 |
