Gene Information

Name : lspA (SSON_0032)
Accession : YP_309064.1
Strain : Shigella sonnei Ss046
Genome accession: NC_007384
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 32373 - 32867 bp
Length : 495 bp
Strand : +
Note : SPase II; lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence : 
ATGAGTCAATCGATCTGTTCAACAGGGCTACGCTGGCTGTGGCTGGTGGTAGTCGTGCTGATTATCGATCTGGGCAGCAA
ATACCTGATCCTCCAGAACTTTGCTCTGGGGGATACGGTCCCGCTGTTCCCGTCGCTTAATCTGCATTATGCGCGTAACT
ATGGCGCGGCGTTTAGTTTCCTTGCCGATAGCGGCGGCTGGCAGCGTTGGTTCTTTGCCGGTATTGCGATTGGTATTAGC
GTGATCCTGGCAGTGATGATGTATCGCTCGAAGGCCACGCAGAAGCTAAACAATATCGCTTACGCGCTGATTATTGGCGG
CGCGCTGGGCAACCTGTTCGACCGCCTGTGGCACGGCTTCGTTGTCGATATGATCGACTTCTACGTCGGCGACTGGCACT
TCGCCACCTTCAACCTTGCCGATACTGCCATCTGTGTCGGTGCGGCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGA
GCGAAAAAACAATAA

Protein sequence : 
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGIS
VILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSR
AKKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 5e-20 47
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 6e-20 47
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 8e-20 47
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 6e-21 45
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 6e-21 45
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 6e-21 45
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 9e-21 45
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 9e-21 45