|
Name : SSON_2666 (SSON_2666) Accession : YP_311524.1 Strain : Shigella sonnei Ss046 Genome accession: NC_007384 Putative virulence/resistance : Unknown Product : protein encoded within IS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 2826339 - 2827730 bp Length : 1392 bp Strand : - Note : Code: L; COG: COG3436 DNA sequence : ATGAACTTCGGCAGTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGA GAGCGATACGCTGACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCC CTGAATCACTACCCCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTAT CTGGGCGAGGATACCGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGC CTGTACTCAGTGCGATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGC TGGCCCGCGTGCTGACCTCGAAGTATGCAGAGCACACCCCGCTGTATCGCCAGTCAGAAATATACGGCCGGCAAGGTGTG GAGCTGAGCCGTTCACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGATGGAAGAGGCGCTTCATGG CTATGTGCTGACTGACGGTAAGCTCCATGTTGATGACACGCCTGTCCCGGTGCTGTTGCCAGGCAATAAGAAAACGAAGA CCGGGCGGTTGTGGGCGTATGTTCGTGACGACCGTAACGCCGGGTCAACGCTGGCGCCGGCGGTGTGGTTCGCTTACAGC CCGGACAGAAAAGGCATCCATCCGCAGACCCATCTTGCGGGGTTCAGTGGTGTACTGCAGGCGGATGCATACGCCGGGTT CAACGAGCTGTACCGGGATGGCCGGATAACGGAAGCCGCCTGTTGGGCTCACGCCCGCCGTAAAATCCACGATGTGCACG TTCGCACCCCGTCAGCCCTGACGGAGGAAGCGCTGAAACGGATCGGCGAACTGTACGCCATCGAGGCAGAGATAAGGGGA ATGACGGCGGAACAGCGCCTTGCCGAACGTCAGTTGAAAACGAAACCGCTGCTGAAATCCCTGGAAAGCTGGCTGCGTGA AAAGATGAAAACCCTGTCGCGACACTCAGAACTGGCGAAAGCGTTCGCATACGCCCTGAACCAGTGGCCGGCGCTGACGT ACTATGCAGATGATGGCTGGGCTGAGGCGGACAATAACATCGCTGAAAATGCGTTGCGGATGGTCAGTCTGGGCCGCAAA AACTACCTGTTCTTCGGTTCGGATCATGGAGGAGAGCGGGGAGCGCTGCTGTACAGCCTGATCGGGACGTGCAAACTGAA CGGAGTGGAGCCAGAAAGCTACCTCCGCTATGTCCTTGACGTCATAGCCGACTGGCCGATAAACCGGGTCGGCGAACTGC TCCCCTGGCGCGTAGCACTGCCGACTGAATAA Protein sequence : MNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSY LGEDTAEQLELMRSAFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGV ELSRSLLSGWVDACCRLLSPMEEALHGYVLTDGKLHVDDTPVPVLLPGNKKTKTGRLWAYVRDDRNAGSTLAPAVWFAYS PDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRG MTAEQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRK NYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 9e-173 | 99 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 0.0 | 94 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 0.0 | 94 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 0.0 | 94 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 0.0 | 94 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 94 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 94 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 0.0 | 94 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 0.0 | 94 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 0.0 | 94 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 0.0 | 94 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 0.0 | 94 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 0.0 | 94 |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | Protein | 3e-162 | 78 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 6e-152 | 65 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 2e-107 | 64 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 6e-151 | 64 |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 6e-151 | 64 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 8e-139 | 63 |
| tnp | AEA34687.1 | IS66 family transposase | Not tested | Not named | Protein | 5e-96 | 58 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 3e-125 | 57 |
| ECO103_3554 | YP_003223421.1 | hypothetical protein | Not tested | LEE | Protein | 5e-111 | 56 |
| Z4317 | NP_289543.1 | hypothetical protein | Not tested | OI-122 | Protein | 3e-111 | 56 |
| EXB16 | ABD94703.1 | ISPpu14 transposase Orf3 | Not tested | ExoU island B | Protein | 8e-63 | 42 |
| RL059 | AAP84184.1 | transposase | Not tested | PAPI-1 | Protein | 3e-71 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSON_2666 | YP_311524.1 | protein encoded within IS | VFG1700 | Protein | 4e-173 | 99 |
| SSON_2666 | YP_311524.1 | protein encoded within IS | VFG0793 | Protein | 0.0 | 94 |
| SSON_2666 | YP_311524.1 | protein encoded within IS | VFG1051 | Protein | 2e-162 | 78 |
| SSON_2666 | YP_311524.1 | protein encoded within IS | VFG1513 | Protein | 1e-107 | 64 |
| SSON_2666 | YP_311524.1 | protein encoded within IS | VFG1736 | Protein | 4e-120 | 63 |
