|
Name : SSON_1028 (SSON_1028) Accession : - Strain : Shigella sonnei Ss046 Genome accession: NC_007384 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 1108217 - 1108720 bp Length : 504 bp Strand : + Note : SSO1028 DNA sequence : ATGCCGGGCAACTGCACGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAAT CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGA ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT CTGAACATAAAACACTATCAATAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4113 | YP_006098397.1 | transposase | Not tested | Tn2411 | DNA | e-281 | 98.4 |
| EC042_4085 | YP_006098368.1 | transposase | Not tested | Tn2411 | DNA | e-281 | 98.4 |
| insB | NP_458736.1 | insertion element IS1 protein InsB | Not tested | SPI-7 | DNA | e-281 | 98.4 |
| InsB (Tn1) | CAJ77072.1 | Transposase | Not tested | AbaR1 | DNA | e-269 | 98.3 |
| insB | ADD91744.1 | transposase | Not tested | PAI-I AL862 | DNA | e-255 | 94.8 |
| aec38 | AAW51721.1 | InsB | Not tested | AGI-3 | DNA | e-207 | 92.3 |
| Z1192 | NP_286727.1 | IS1 protein InsB | Not tested | TAI | DNA | e-235 | 92.2 |
| Z1632 | NP_287135.1 | IS1 protein InsB | Not tested | TAI | DNA | e-235 | 92.2 |
| tnpH | AAD44742.1 | TnpH | Not tested | SHI-2 | DNA | e-232 | 91.8 |
| S4059 | NP_839227.1 | IS1 orfB | Not tested | SHI-2 | DNA | e-231 | 91.6 |
| insB | NP_709463.1 | IS1 ORF2 | Not tested | SHI-2 | DNA | e-176 | 91 |
| insB | NP_709451.1 | IS1 ORF2 | Not tested | SHI-2 | DNA | e-227 | 91 |
