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Name : tkt (cbdb_A629) Accession : YP_307719.1 Strain : Dehalococcoides sp. CBDB1 Genome accession: NC_007356 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 516339 - 518339 bp Length : 2001 bp Strand : - Note : - DNA sequence : ATGTCAAATACGAAATTAGATAGTTTATGCATAAACGCCCTTCGCTTTCTTTCGGTAGACGCTGTTCAGAAGGCAAATTC GGGGCATCCCGGAGCGCCTATGGGTATGGCCGCTATGGCATATGCCCTGTGGCAAAATTTTCTCAAGCATAACCCGCAGG ACCCCGCTTGGCCTAACCGTGACCGTTTTATACTTTCAGCCGGCCATGCCTCTGCCCTGCTTTATTCACTACTCCACCTG ACCGGTTATGACCTGCCGCTGGACGAACTTAAAAATTTCCGCCAGTGGGGCAGTAAAACACCGGGACATCCGGAATACGG CCTGACTCCCGGGGTTGAAATGACTACCGGCCCGCTTGGGCAGGGTTTTGCAAGCGGTGTGGGTATGGCTATGGCCGAAG CTCATTTGGCAGCGGTTTTTAACCAGCCGGATTGCAAAATTATAGACCATTATACCTACGGCATAGTCTCTGACGGAGAC CTGATGGAAGGCGTAGCTTCAGAAGCGGCCTCTCTGGCCGGGCATTTAGCCCTTGGCAAGCTGATTTATCTGTATGATGA CAATGATATATCTATTGAAGGTTCAACTGAGCTGGCTTTTACCGAAAACGCAGCTCTGCGCTTTGAAAGTTACGGCTGGC AGGTTATAGACCATGTAGACGGGCTTGACCCGGAGGCGGTATCTCAGGCTATTAAACAAGCCCAGTCAGATACCACCCGC CCCAGCCTGATTATCTGCAAAACAATCATCGGCTTTGGCAGCCCGAATAAGGCCGGCAAGGCCTCTGCCCATGGCGAGCC GCTGGGAACAGATGAGGTATCCAAGAGCCGTAAATCTCTGGGGTGGGACTATGAACCGTTTGTAATACCAGTTGAGGCTC TAACAGAGTTCCGCGAAGCACTGGGCAAGGGCAAAACAGCCCAGCAGGTTTGGTTGTCCAAGCTGGACTACTATTTAAGC CATTATCCCGAAAAAGCCTCACTGCTGCAGGACATGCTTTCGGGCAACTTACCTGAAGACTGGGACAAAGATCTGGATAG ACTCTTTGACAAAGCTATGTCAAGCCGCGAGGCTTCAGGCCTGCTGATAAATGCCTTGGCTTCCCGCCTGCCTTCTCTCA TGGGTGGTTCGGCAGACCTCAGCCCGTCTAACAAGACCGTTATCAAAGACGGCGGGGAATACGAACCTCACTATTACGAG GGACGGAATATCCATTTCGGAGTGAGGGAGCACGCCATGGGGGCAATAGCTAACGGACTGGCTCTCCACGGGGGCATAAT ACCTTACGTTGCCACTTTCCTCATATTTTATGACTACATGCGTCCGGCTGTACGGTTGGCTTCACTTATGGGGCAAAGGG TGATTTATATTTTTACCCATGATTCCATCGGTCTGGGAGAAGACGGCCCTACCCACCAACCCATTGAACAGCTGGCCGGT CTGCGTTCGGTACCCGGTCTGGTTACTATCCGTCCGGCAGATTCATATGAGACTGCTCAGGCATGGAAAACGGCTATACT CCGTAAGAACGGCCCTACCGCCATTGCCCTGTCCCGTCAGAAACTGCCGCTTTTAGATAACTCTCAGACAAAATCCTTAA ACCTGCCTAAAGGGGCATATATACTGCAGGAAACAGACTCCCACCCGCAGGTAGCTCTAGTTGCCAGCGGGTCTGAAGTA ACTATAGCGGTTGAAGCGGCTGAAATACTTAAGGGGAAAGGCATATCCTCAAGGGTAGTATCTTTCCCTTCATGGCAGCT TTTTGATAACCAACCCCAAACCTACCGCCAGAGTGTCCTGCCTTCTTCCCTGCCACGGGTAATAATGGAAGCTGGCAACT CACAGGGCTGGTGCAAATATCTGGGTACAAACGGAACTGTTATATCAATTGACCACTTCGGGGCATCAGCCCCGGCAGCC CTGCTTTACAAAAACTTCGGCCTGACCCCTGAAAACATGGCTGAAAAAGCTTTAAAGCTTTTGGAGAATGAACATGAGTA A Protein sequence : MSNTKLDSLCINALRFLSVDAVQKANSGHPGAPMGMAAMAYALWQNFLKHNPQDPAWPNRDRFILSAGHASALLYSLLHL TGYDLPLDELKNFRQWGSKTPGHPEYGLTPGVEMTTGPLGQGFASGVGMAMAEAHLAAVFNQPDCKIIDHYTYGIVSDGD LMEGVASEAASLAGHLALGKLIYLYDDNDISIEGSTELAFTENAALRFESYGWQVIDHVDGLDPEAVSQAIKQAQSDTTR PSLIICKTIIGFGSPNKAGKASAHGEPLGTDEVSKSRKSLGWDYEPFVIPVEALTEFREALGKGKTAQQVWLSKLDYYLS HYPEKASLLQDMLSGNLPEDWDKDLDRLFDKAMSSREASGLLINALASRLPSLMGGSADLSPSNKTVIKDGGEYEPHYYE GRNIHFGVREHAMGAIANGLALHGGIIPYVATFLIFYDYMRPAVRLASLMGQRVIYIFTHDSIGLGEDGPTHQPIEQLAG LRSVPGLVTIRPADSYETAQAWKTAILRKNGPTAIALSRQKLPLLDNSQTKSLNLPKGAYILQETDSHPQVALVASGSEV TIAVEAAEILKGKGISSRVVSFPSWQLFDNQPQTYRQSVLPSSLPRVIMEAGNSQGWCKYLGTNGTVISIDHFGASAPAA LLYKNFGLTPENMAEKALKLLENEHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 6e-143 | 53 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 4e-136 | 51 |
