|
Name : cbdb_A327 (cbdb_A327) Accession : YP_307464.1 Strain : Dehalococcoides sp. CBDB1 Genome accession: NC_007356 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 283166 - 284047 bp Length : 882 bp Strand : - Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : ATGGAAACCGGTACTTTCAAAGTAAAATCTGGCCTGGCCCAAATGCTGAAGGGCGGGGTAATTATGGATGTAACTACCCC CGAACAGGCTAAAATAGCAGAAGAAGCAGGTGCCTGTGCCGTTATGGCACTGGAACGCGTACCTTCGGATATCAGAGCGG CCGGCGGGGTAGCCCGCATGGCAGACCCCACTATTATCGAGCAGATTATGAAAGTAGTCAGCATACCCGTTATGGCCAAG TGCCGTATCGGCCATTTTGTGGAAGCCCAAATACTGGAATCCATGGGGGTGGACTACATTGACGAGTCCGAAGTGCTTAC CCCGGCTGACGAAAATTTCCACGTCTGGAAACATGACTTTAAAGTCCCCTTCGTCTGCGGCTGCCGTGATCTGGGCGAAG CCCTAAGGCGGATTGGCGAGGGTGCGGCTATGATACGCACCAAAGGCGAAGCCGGTACCGGCAACATTGTGGAAGCGGTA AGGCATATGCGTTCCGTTATGGGCTCTGTCAGAAGGGTACAGTCCATGTCACCTGACGAATTGTCCGCTTATGCCAAAGA GATAAATGCACCTCTGGAATTGGTGCTTGAACTTCATAAGACCGGCAAACTGCCGGTAGTGAACTTTGCCGCCGGCGGAG TAGCTACCCCGGCCGATGCGGCCTTGATGATGCAACTGGGGGCTGACGGGGTATTTGTGGGCTCAGGTATATTTAAATCA TCAAACCCCTCGGCCATGGCCAAAGCAGTAGTAAAGGCTGTGACCCACTATAAAGATGCCCAAATACTGGCTGAGATATC CAAGGGTCTGGGTGATGCCATGCCCGGTCTGGATATTAAACAGATAGATCCCGATAAACTTATTTCCCAGCGGGGTTGGT AA Protein sequence : METGTFKVKSGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVARMADPTIIEQIMKVVSIPVMAK CRIGHFVEAQILESMGVDYIDESEVLTPADENFHVWKHDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNIVEAV RHMRSVMGSVRRVQSMSPDELSAYAKEINAPLELVLELHKTGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS SNPSAMAKAVVKAVTHYKDAQILAEISKGLGDAMPGLDIKQIDPDKLISQRGW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 2e-85 | 67 |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 2e-85 | 66 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 3e-85 | 66 |
