Gene Information

Name : cbdb_A1487 (cbdb_A1487)
Accession : YP_308425.1
Strain : Dehalococcoides sp. CBDB1
Genome accession: NC_007356
Putative virulence/resistance : Unknown
Product : transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1173967 - 1174770 bp
Length : 804 bp
Strand : +
Note : -

DNA sequence :
GTGCGTATCAGCCTTGGAATCTCTGAAAGACGGGCTTGTCAGGTGCTGGGTCAAGCCAGATCAACACAGCGCCGTAAAGA
ATCGATTACCGACGACGAAGCGAAGCTTACGCTACGAATAATTGAACTGGCCAGCAAATACGGACGATACGGGTATCGGA
GAATCACGGCGATTTTGCAAATAGCTGGTTGGAGAGTGAATCACAAAAGAGTCGAACGGATCTGGAGAAAGGAAGGGCTG
AAGGTGCCCCAGAAGCAACCCAAGCGCGGTAGACTATGGCTCAACGATGGATCATGTATCCGCCTCCGGCCGGAGTATAA
GGACCATGTCTGGAGTTATGATTTCATGGTAGACCGCACGGCTAACGGCAGGGCTTTCAAGACACTGAATATTATTGATG
AATATACCCGGGTATGTTTAAAAATCAAAGTTAATCGTAAGATCAAGAGTCAGGATGTAATCGACCAACTGTATGATCTG
TTTATCTTTCGGGGAATTCCTGAGTATATCCGCTCGGATAATGGGCCGGAGTTTACGGCTAAAGCAGTGCGCAAATGGCT
GAGCCGGTTAGGAGTAAAGACGCTTTTTATTGAGCCCGGCAGTCCCTGGGAAAATGGGTATATTGAATCCTTTAACGGCA
AGCTGCGGGATGAACTATTGGATCGGGAGATCTTTACTACACTGGAAGAAGCTAAAGTATTGATAGAGCAATGGAGGAGG
GAATATAATCAAGTACGCCCGCATAGCTCTCTTGGATACAGACCACCAGCACCGGAGGCTGTGTTAACTATGATGACGAG
TTAG

Protein sequence :
MRISLGISERRACQVLGQARSTQRRKESITDDEAKLTLRIIELASKYGRYGYRRITAILQIAGWRVNHKRVERIWRKEGL
KVPQKQPKRGRLWLNDGSCIRLRPEYKDHVWSYDFMVDRTANGRAFKTLNIIDEYTRVCLKIKVNRKIKSQDVIDQLYDL
FIFRGIPEYIRSDNGPEFTAKAVRKWLSRLGVKTLFIEPGSPWENGYIESFNGKLRDELLDREIFTTLEEAKVLIEQWRR
EYNQVRPHSSLGYRPPAPEAVLTMMTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 3e-28 42
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-39 41