Gene Information

Name : cbdb_B31 (cbdb_B31)
Accession : YP_308424.1
Strain : Dehalococcoides sp. CBDB1
Genome accession: NC_007356
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1173656 - 1173934 bp
Length : 279 bp
Strand : +
Note : -

DNA sequence :
ATGCCTAGAAAAGCTTTTACCGCGGAACAGATCATCAACAAGCTTCGTGAAGCCGAGCTGATTCTGAATCAGGGCACAAC
GGTGCCTGAAGCCTGCCGAAAGATTAGAGTTACCGATCAGACCTACTATCGATGGTGCAAGGAATATGGCGGCTTAAACA
TCGACCAGGCCAAGCGCCTTAAGGACCTGGAAAAAGAAAACGTCCAGCTAAAGCGCCTTGTGGCCGATCTTTCACTCGAT
AAGGCCATATTGAAGGAGGCGTCCCGGGGAAACTCCTAA

Protein sequence :
MPRKAFTAEQIINKLREAELILNQGTTVPEACRKIRVTDQTYYRWCKEYGGLNIDQAKRLKDLEKENVQLKRLVADLSLD
KAILKEASRGNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-14 50
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 4e-14 50
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-13 44
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-13 44
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-13 43
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-13 43
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 9e-12 41