Gene Information

Name : cbdb_A1288 (cbdb_A1288)
Accession : YP_308261.1
Strain : Dehalococcoides sp. CBDB1
Genome accession: NC_007356
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1021195 - 1021404 bp
Length : 210 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAATAAACTTAAGGTGTTAAGAGCTATAAACAGCCTCACTCAGGAAGAACTGGCAGACAAACTGGGCATTACCCG
CCAGACAGTTATTTCTATAGAACGGGGTAAGTATTCCCCTTCTCTGGAGCTGGCTTTCAAAATAGCCTCCCTTTTTGAAA
CACCTATAGAAGAAATATTTGTATATAACACTGAACAGGAAGGGCAATGA

Protein sequence :
MQNKLKVLRAINSLTQEELADKLGITRQTVISIERGKYSPSLELAFKIASLFETPIEEIFVYNTEQEGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-10 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-10 48
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-10 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbdb_A1288 YP_308261.1 DNA-binding protein VFG2168 Protein 1e-10 48
cbdb_A1288 YP_308261.1 DNA-binding protein VFG2175 Protein 1e-10 48