Gene Information

Name : cbdb_A1160 (cbdb_A1160)
Accession : YP_308166.1
Strain : Dehalococcoides sp. CBDB1
Genome accession: NC_007356
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 942978 - 944042 bp
Length : 1065 bp
Strand : +
Note : -

DNA sequence :
TTGCCATCAAATGAAATAGCAAATAAGCTGCCCCTGCTTGACCGGTTTCTGACACTATGGATATTTCTGGCCATGCTTGG
AGGCATTGGTCTGGGGTATTTTGTACCCCAGACTTCAGACATTATCACTTCTTTTCAAATCGGCACTACTTCAATACCAA
TTGCTGTCGGCCTTATTCTTATGATGTTCCCGCCTCTGACCAGAGTCCGATATGAAAAAATCCCTCTGGTTTTTAAAGAT
TTGAAGTTCCTTAGCTTTTCATTGCTCTTAAACTGGGTGATTGGGCCTATGCTGATGTTTGGGCTGGCACTCCTCTTCCT
TCGTGATTACCCCGAATACATGATTGGCATTATTATGGTTGGGCTAGCCAGATGCATCGCTATGGTAATTGTGTGGAATG
AGCTGGCAAAAGGTGACCGTGAATATGCAGTGGGGCTGGTGGGTATAAATGCTATTTTCCAGGTACTTTTTTACTCGGTT
TATATATATTTCTTCATTACCTTTCTTTTGGGGAAAATGGGACTGGCAGATGGTCTGGATATTGAACTTTCTATAGCTCA
AGCAGCTAAAACTGTTTTCATTTATCTTGGAATACCTTTCTTACTGGGGGTTATCACCCGTTATAGCCTGCTGGCACTTA
AAGGCAAAGACTGGTTTGAAAATCGTTTCATACCCAGGTTTAGCCTGATTACTCCTATCGCCCTTTTATTCACCATTGTA
ATCATGTTTTCCCTGAAGGGAGAATACATCGTTGAACTGCCTCTGCATGTACTGCGAATAGCTATCCCACTGGTATTATA
TTTTGGAATAATGTGGTTCGGGGCATTTTTTGTCAGTAAAAAATTAAATGCCGGTTACCAAAAAACAGCCACCGTAGCAT
TCACCGCCAGCTCGAATGATTTTGAACTGGCTATCGCAGTAACTATTGCCTTGTTCGGGTTAAATTCCGGTGAAGCATTT
GCATCCGTCATAGGTCCGCTTATAGAAGTGCCGGCTCTGATATTATTGGTAAATGCCTCATTGCGTCTAAAAAAGAGATT
CCTCTCCGAAGCACCCACTGCTTAA

Protein sequence :
MPSNEIANKLPLLDRFLTLWIFLAMLGGIGLGYFVPQTSDIITSFQIGTTSIPIAVGLILMMFPPLTRVRYEKIPLVFKD
LKFLSFSLLLNWVIGPMLMFGLALLFLRDYPEYMIGIIMVGLARCIAMVIVWNELAKGDREYAVGLVGINAIFQVLFYSV
YIYFFITFLLGKMGLADGLDIELSIAQAAKTVFIYLGIPFLLGVITRYSLLALKGKDWFENRFIPRFSLITPIALLFTIV
IMFSLKGEYIVELPLHVLRIAIPLVLYFGIMWFGAFFVSKKLNAGYQKTATVAFTASSNDFELAIAVTIALFGLNSGEAF
ASVIGPLIEVPALILLVNASLRLKKRFLSEAPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-66 55
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 7e-86 55
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 5e-86 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbdb_A1160 YP_308166.1 arsenical-resistance protein BAC0573 Protein 3e-95 58
cbdb_A1160 YP_308166.1 arsenical-resistance protein BAC0004 Protein 1e-74 52