Gene Information

Name : Mbar_A0021 (Mbar_A0021)
Accession : YP_303593.1
Strain : Methanosarcina barkeri Fusaro
Genome accession: NC_007355
Putative virulence/resistance : Virulence
Product : UDP-glucose 4-epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 25559 - 26485 bp
Length : 927 bp
Strand : +
Note : -

DNA sequence : 
TTGAAAACTAAAAATGTAGTAGTCACAGGTGGTATGGGTTTCATTGGTTCCCATCTTACTGAGAGGCTACTTGAAGATAA
TGAAGTAACAGTTATTGATAACGAATCTACAGGTAACATTGAAAATATAAGACATCTACTAGACCACGAAAATCTAACTG
TAATAAAAGGCAGTATAGTAGACTTGAATTTAACAGAAATTTTCAAAGACAAGGATTATGTTTTTCATCTTGCAGCAATT
CCCAGTGTTCCAAGAAGTGTAAAAGATCCTTTTAGTTCAAATAACTCTAATATCACAGGAACACTGAATGTTCTGACAGC
TGCAAAAGATACTGGAATTAAGAAATTAATATTTTCTTCTTCCTCTTCGGTGTATGGCGATACGCCAACTCTCCCAAAAA
GAGAAGATATGCCCATAAACCCAATGTCTCCATATGCAATTACAAAAGCAACCGGAGAAATGTACTGCAGGGTTTTTCAG
GATCTTTATGATCTGCCAACAGTTAGTTTAAGATATTTCAACGTTTTTGGCCCTCGGCAGGACCCAAATTCTCAATATGC
AGCTGTAATCCCAAAATTTATAACTGCAATTCTAAACGATGAGAGTCCCGTGATATACGGAGACGGAGAACAAAGCAGAG
ACTTCACTTTTGTCAAAAAAGTTGTTGATGCGAATATTCTTTCCTGCGAGTCTAAGAAAACTGGAGTTTTCAATATAGCA
TGTGGTAGAAGAATTACAATTAATCAGTTAGTCGATTACGTTAATGAAATACTGGGAAAGAAAATAAAATCGATACATGC
AGAACCAAGACCAGGGGATATTAAGCACTCATTAGCAGATATATCAAAGGCTAAAGAATTCGGATATAATCCCATTGGTA
ATTTTAGGGATGAACTTAAGACAGTAGCAGAATGGTTCCTGAACTAA

Protein sequence : 
MKTKNVVVTGGMGFIGSHLTERLLEDNEVTVIDNESTGNIENIRHLLDHENLTVIKGSIVDLNLTEIFKDKDYVFHLAAI
PSVPRSVKDPFSSNNSNITGTLNVLTAAKDTGIKKLIFSSSSSVYGDTPTLPKREDMPINPMSPYAITKATGEMYCRVFQ
DLYDLPTVSLRYFNVFGPRQDPNSQYAAVIPKFITAILNDESPVIYGDGEQSRDFTFVKKVVDANILSCESKKTGVFNIA
CGRRITINQLVDYVNEILGKKIKSIHAEPRPGDIKHSLADISKAKEFGYNPIGNFRDELKTVAEWFLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 8e-50 41
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 8e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mbar_A0021 YP_303593.1 UDP-glucose 4-epimerase VFG0430 Protein 4e-50 41