Gene Information

Name : Mbar_A1667 (Mbar_A1667)
Accession : YP_305191.1
Strain : Methanosarcina barkeri Fusaro
Genome accession: NC_007355
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 2057553 - 2059100 bp
Length : 1548 bp
Strand : +
Note : -

DNA sequence :
ATGAGCATGGAAATTAACAATGAAAAAATGTCAGATAGCCTTGTACCGTCTGACAATGAATCTGACAATAATGATATTTC
AGATAGCAGGGTCTTTGATGATTCTAAACTTGCAAAACTAAACGGCATCAAAAGCCAGGGACTTAATCCGTACCCCTATA
AATTTGAAAAGAATGGGGATATCTGTGATATCCAGAAAAAGTTCGAGGACTTTGAAAAGAATGAAGGGCTAACGGTTAGA
ACCGCAGGAAGGCTTTACAATATTCGCAGGCTTGGAAAAATGATATTTGCCGATCTTGGAGACCAGGGGGGCAGAATTCA
GGTTACTTTAAGGAAAGGAAATCTTCCTGATGAGGATTTCAAGACTTTTAAAACCCTGGTAGATTCAGGAGATATCGTAG
GTGTTCAGGGCACACTTTTCAGGACAAAACGGGGTGAGAACTCTATCAGCGTGTCCGAATTCTCCCTTCTCTCAAAATCT
CTCTGTGCCCTTCCCGAAAAATTCCACGGCTTAAAAGACGTTGAAACCAGGTACAGAAAAAGGTATCTTGACCTTATAGT
CAATGCTGATAAGAGAGAGATTTTCGTCATGAGGAGCAAACTCATCTCTGAGATCAGACGATACCTTTCTGACAGGGAAT
TTCTGGAATTTGAAACTCCAATACTCCAGAATGTGTACGGAGGCGCAAATGCAAGGCCTTTCACGACTTTCCATAACTGT
CTCGGTCAGAAACTCTTCCTTAGAATTGCTCCTGAACTTTATCTTAAGAGGCTTGTTGTTGGCGGTTACGAGAAGGTCTT
TGAGATCTCCAAGAATTTCAGGAATGAAGATATCGACACAACTCATAACCCTGAGTTCACCATGATCGAAGTCTATGAAG
CTTACAGGGATTACAATGACATGATGGATTTAACCGAAGGCCTAATTTCGGAACTTGTGTTCAAGCTGACTGGCAGCTAT
GAAGTTAAAATTGGCGAAAACACACTTAATCTTCATACCCCCTGGAAAAGAATTTCCATGGAAGATGCCTTAAAAGAATA
TGCTGGACTTGATGTTTTTGCACACTCGCTTGAAGAATTGAAACAAATCGCAATCGAAAACAGAATCGAGGACTACGAAA
AAGCAAAAACTTACGGAGAGTTCCTTGCCTTGCTCTTTGAAGGCCTGGTAGAGGACAAGCTGATAAATCCGACTTTCATT
TATGATTTCCCTGTGGAAAACTCCCCTCTTGCCAAAAATCACAGGTCAAAAGAAGGCTTTGTCGAGAGATTCGAGCTCTT
CTTAAATGGCTGGGAATTGGCAAATGGTTATTCCGAACTGAACGATCCTATTGAACAGCAAAAAAGGTTCGAAGAACAGG
ACAAGAAAAGAAAGTTAGGAGACCTTGAAGCCCAGACCATTGATTACGATTTCGTAAATGCCCTCGGATACGGAATGCCC
CCTACAGGCGGCATGGGACTTGGAATCGACAGGCTTACCATGATTCTAGCGGGCCTGGACTCTATCAAAGAAGTAATCCT
TTTCCCACAGATGAAAAGGGAAGACTGA

Protein sequence :
MSMEINNEKMSDSLVPSDNESDNNDISDSRVFDDSKLAKLNGIKSQGLNPYPYKFEKNGDICDIQKKFEDFEKNEGLTVR
TAGRLYNIRRLGKMIFADLGDQGGRIQVTLRKGNLPDEDFKTFKTLVDSGDIVGVQGTLFRTKRGENSISVSEFSLLSKS
LCALPEKFHGLKDVETRYRKRYLDLIVNADKREIFVMRSKLISEIRRYLSDREFLEFETPILQNVYGGANARPFTTFHNC
LGQKLFLRIAPELYLKRLVVGGYEKVFEISKNFRNEDIDTTHNPEFTMIEVYEAYRDYNDMMDLTEGLISELVFKLTGSY
EVKIGENTLNLHTPWKRISMEDALKEYAGLDVFAHSLEELKQIAIENRIEDYEKAKTYGEFLALLFEGLVEDKLINPTFI
YDFPVENSPLAKNHRSKEGFVERFELFLNGWELANGYSELNDPIEQQKRFEEQDKKRKLGDLEAQTIDYDFVNALGYGMP
PTGGMGLGIDRLTMILAGLDSIKEVILFPQMKRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 6e-95 43
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 8e-84 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mbar_A1667 YP_305191.1 lysyl-tRNA synthetase VFG1668 Protein 3e-95 43