Gene Information

Name : SSP0089 (SSP0089)
Accession : YP_300179.1
Strain : Staphylococcus saprophyticus ATCC 15305
Genome accession: NC_007350
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 106172 - 106834 bp
Length : 663 bp
Strand : +
Note : similar to gi|31616138|gb|AAP55232.1| [Staphylococcus aureus], percent identity 72 in 218 aa, BLASTP E(): 7e-87

DNA sequence :

ATGCTAGAATTTAAAAATGTCACGAAATATTTCCAAGATGGAAACCAAAAAATAGAAGCTGTGAAACCTACCTCACTAAA
ATTTAATCAAACTGAACTCATTGCAATTATAGGACCTTCAGGATCTGGGAAAAGTACTTTCCTAACTATGGCGGGCGCAC
TTCAAACACCGACGTCTGGAGAGATTCTCATTAATGGTAAGGAAGTCTCCCAGATGTCTCAGAAAGCATTAGCAAACACG
CGGATGCAGGAGATTGGCTTTATACTTCAAGCAACTAACTTGGTGCCTTTTTTAACGGTGAAACAGCAGTTTAAATTATT
GGCTAAACAAAAGAAAGATGTATTAAGTCAAACTGAATATAAGCAGTTGATGTCACAACTCAATCTCGAAGCAATTGAAA
ATAAACTGCCGAGTGAAATTTCTGGTGGGCAAAAGCAGCGTGTAGCCATTGCTAAAGCGCTATATACACAACCTTCGATT
ATTTTAGCGGATGAACCAACGGCTTCGCTTGATACACAAAATGCGATGGAAGTCATGGAAATTTTAAAAGCACAAACATC
AGAAAAAAATAAAACGTGTATTGTGGTTACACATGATGAACGACTTACATCCTATTGTGACAAGGTTTATCATATGGAAG
ATGGCGTGTTAACACATACTTAA

Protein sequence :

MLEFKNVTKYFQDGNQKIEAVKPTSLKFNQTELIAIIGPSGSGKSTFLTMAGALQTPTSGEILINGKEVSQMSQKALANT
RMQEIGFILQATNLVPFLTVKQQFKLLAKQKKDVLSQTEYKQLMSQLNLEAIENKLPSEISGGQKQRVAIAKALYTQPSI
ILADEPTASLDTQNAMEVMEILKAQTSEKNKTCIVVTHDERLTSYCDKVYHMEDGVLTHT

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	1e-85	90
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	1e-70	73

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SSP0089	YP_300179.1	ABC transporter ATPase	CP001581.1.gene798.p	Protein	9e-35	42