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Name : SSP0009 (SSP0009) Accession : YP_300099.1 Strain : Staphylococcus saprophyticus ATCC 15305 Genome accession: NC_007350 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 12929 - 14212 bp Length : 1284 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATATTAAATTATTCCGTAATGATCCAGAATTCCTTAAAGAAAAAGTTGCAAAACGTGGTATGGATTCAAAAGT AGTAGATGAAGTATTAGAACTAGATGAGCAACGTCGTCAACTTATCAGTCAAGCCGAAGAAATGAAGGCAGAGCGTAATA AAGTGAGTGGAGAAATTGCTCAGAAAAAACGTAATAAAGAAGATGCAGACGATGCAATCGCAGCTATGCGTAATCTAGGT GATGAAATTAAAGTACTAGATGATACTTTAAATCAAGTAGATGTTGACCTTAATGATAAATTGTCTCGTATTCCAAATAT CATTCACGACGATGTACCAGAAGGTGCTACGGATGAAGATAATATAGAAGTTAAACGTTGGGGTACACCTAGAACTTTTG AATTTGAAGATAAAGCACACTGGGATTTAGTAGAAGAGTTAGAGATGGTTGATTTTGAAAGAGCAGCTAAAGTCTCTGGT GCGAGATTCGTATTCTTGACAGGTGACGGTGCACAATTAGAGAGAGCGTTAATGAACTACATGATTACGAAACATACGAC ACAACATGGCTATACGGAAATGATGGTACCACAATTAGTTAATGCCGATTCTATGTATGGTACAGGTCAACTTCCAAAAT TTGAAGAAGACTTATTTAAAGTAGAAAAAGAAGGTCTTTATACCATTCCAACTGCAGAAGTGCCATTAACGAATTATTAC CGCAATGAAATCATTGCACCTGACGTATTACCAGCTAAATTTACAGCTCAATCAGCTTGTTATCGTAGTGAGGCTGGATC TGCTGGTCGTGATACACGAGGACTTATTCGCTTACACCAATTTGATAAAGTTGAAATGGTACGTATTGAAAAACCTGAAG ATTCTTGGCAAGCACTTGAAGACATGACTCATCATGCAGAAGCGATTTTAGAAGAACTTGGTTTACCATATCGCCGTGTT ATCTTGTGTACAGGAGATATTGGTTTTGGTTCAAGTAAAACATATGATTTAGAAGTTTGGTTACCAAGCTATAACGATTA TAAAGAAATCAGCTCTTGTTCAAATATTACAGATTTCCAAGCACGTCGTTCAAACATTCGCTTCAAACGCGATAAAAATG CGAAACCAGAATTAGCGCATACTTTAAATGGTAGCGGGTTAGCTGTAGGTCGTACCTTTGCAGCTATCGTTGAGAACTAC CAAAATGAAGATGGCTCAGTTACAATTCCAGAAGTGTTAGTTCCATTTATGGGTGGTAAAACAGTCATCCGTCCGACTAA ATAA Protein sequence : MLDIKLFRNDPEFLKEKVAKRGMDSKVVDEVLELDEQRRQLISQAEEMKAERNKVSGEIAQKKRNKEDADDAIAAMRNLG DEIKVLDDTLNQVDVDLNDKLSRIPNIIHDDVPEGATDEDNIEVKRWGTPRTFEFEDKAHWDLVEELEMVDFERAAKVSG ARFVFLTGDGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADSMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTNYY RNEIIAPDVLPAKFTAQSACYRSEAGSAGRDTRGLIRLHQFDKVEMVRIEKPEDSWQALEDMTHHAEAILEELGLPYRRV ILCTGDIGFGSSKTYDLEVWLPSYNDYKEISSCSNITDFQARRSNIRFKRDKNAKPELAHTLNGSGLAVGRTFAAIVENY QNEDGSVTIPEVLVPFMGGKTVIRPTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-122 | 60 |
