Gene Information

Name : SSP0070 (SSP0070)
Accession : YP_300160.1
Strain : Staphylococcus saprophyticus ATCC 15305
Genome accession: NC_007350
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 81821 - 82378 bp
Length : 558 bp
Strand : +
Note : similar to gi|16579852|gb|AAL26667.1| [Staphylococcus aureus], percent identity 74 in 185 aa, BLASTP E(): 7e-78

DNA sequence : 
ATGAAAAGAGTTTTTGATTTGTTTACTTCCATAGTAGTTTTAGGATTTTTATCGCCATTCCTATTTTTAGTTTCTATAGC
TATTAAATTAGAATCTAAAGGTCCAATTGTTTTTAAACAAAAACGACCTGGTATAAATAATAAAATTTTTAATATTTATA
AATTTAGATCTATGAAAGTTGAAACACCAGATGTGGCAACTGATAAAATTGATGCTAATATATACATTACTAAATCAGGA
CGTTTTATTAGAAAAACTTCAATTGATGAATTACCTCAATTATTTAATGTTATTAAAGGTGATATGTCTGTAGTTGGTCC
TAGACCAGCTTTATATAATCAATATGATTTGATTGCTAAAAGAACGAATGAAAGTGTGCATACGGTAAAACCTGGACTAA
CGGGCTTAGCACAAGTAATGGGTAGAGATGATATTACAGATGATCAAAAAGTTCAATATGATAAATATTACGTTGAAAAC
CAAACTTTCATTTTAGATATGTTTATTATATACAAAACGATTAGAAACACGATAACATCCGAAGGTGTGAAACATTAA

Protein sequence : 
MKRVFDLFTSIVVLGFLSPFLFLVSIAIKLESKGPIVFKQKRPGINNKIFNIYKFRSMKVETPDVATDKIDANIYITKSG
RFIRKTSIDELPQLFNVIKGDMSVVGPRPALYNQYDLIAKRTNESVHTVKPGLTGLAQVMGRDDITDDQKVQYDKYYVEN
QTFILDMFIIYKTIRNTITSEGVKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 6e-84 100
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 9e-68 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein VFG1309 Protein 3e-63 69
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein VFG1369 Protein 5e-33 49