Gene Information

Name : SSP0062 (SSP0062)
Accession : YP_300152.1
Strain : Staphylococcus saprophyticus ATCC 15305
Genome accession: NC_007350
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG4464
EC number : -
Position : 72393 - 73157 bp
Length : 765 bp
Strand : +
Note : similar to gi|49484857|ref|YP_042081.1| [Staphylococcus aureus subsp. aureus MRSA252], percent identity 54 in 251 aa, BLASTP E(): 1e-76

DNA sequence : 
ATGATAGATGTTCATAATCATTTATTAATTGGTGTAGATGATGGTCCGCAATCAGTAGAAGAAACAATTAGTTTATTAGA
ACAAGCTAAAAAGCAAGGTATAACAGGAATCGTTGTTACACCGCATCATTTACACCCTAAATATGACAATATATTTGCTG
ATGTAGAATGGGGAATTAATAAGTTACAACATAATCAACAAATCAAAGACTTAGAAATCCAATTATATGCTGGTCAAGAA
ATCAGGATAACTGACCAAATATTGGATGATTTAGAGCAACATAAAGTTAAAGGCATTAACGGATCTAAATATCTTCTAAT
AGAATTACCTTCTAATTCAGTACCTCACTACACCAAGAATCTTCTTTATGAAATTCAAACTAAAGGTTTTGTTCCGATAA
TAGCGCATCCAGAGCGTAATAAAGCAATTGCCAAAAATATTAATTTACTTTATGAATTAATAAACAATGGTGCGTTAAGT
CAAATCACTGCTTCATCTTTAACAGGTGAGCTTGGTAAAAATATACAAAAATTATCTATACAAATTTTAGAACACAATTT
AGTGCATTTTGTTGCATCAGATGCACATCATTCAGAAAGTAGACCATTTAGTTTGGATGCTTTGTTTAGTACGCCTAAAT
TAAAAAATATTGAATCTGTTATAAGCATGTTACTAGATAATAATGAGGCAATGATTCAAGACAAGAGTGTGGTTACGGGA
AGACCCATTGAATTTAAGAGGAATAAATTTTTTGGTCTATTTTAA

Protein sequence : 
MIDVHNHLLIGVDDGPQSVEETISLLEQAKKQGITGIVVTPHHLHPKYDNIFADVEWGINKLQHNQQIKDLEIQLYAGQE
IRITDQILDDLEQHKVKGINGSKYLLIELPSNSVPHYTKNLLYEIQTKGFVPIIAHPERNKAIAKNINLLYELINNGALS
QITASSLTGELGKNIQKLSIQILEHNLVHFVASDAHHSESRPFSLDALFSTPKLKNIESVISMLLDNNEAMIQDKSVVTG
RPIEFKRNKFFGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0062 YP_300152.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 4e-117 100
cap1C AAA64642.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-63 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSP0062 YP_300152.1 capsular polysaccharide biosynthesis protein VFG1299 Protein 6e-64 50